Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0646
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.2  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   7.2  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.2  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.2  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    22   9.5  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 56  IKELFLLSTANNHNHHY 106
           + EL+ L+  +NH++HY
Sbjct: 199 LHELYQLNGVHNHSNHY 215


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 471 LIIIIKFQLDSPDRP 427
           L+++++FQ+  PD P
Sbjct: 352 LVVLLQFQISIPDEP 366


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -2

Query: 287 FIIVVRF--PASY--PVSGKHLYHEQLLFPLNICV 195
           F++VV    P S   P+ GK+L    +L  ++ICV
Sbjct: 289 FLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICV 323


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -2

Query: 287 FIIVVRF--PASY--PVSGKHLYHEQLLFPLNICV 195
           F++VV    P S   P+ GK+L    +L  ++ICV
Sbjct: 289 FLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICV 323


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 264 WEAYYYYKQPGASLSLK 314
           W AY  YK  G SL+ K
Sbjct: 591 WAAYAVYKHSGKSLNEK 607


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,815
Number of Sequences: 2352
Number of extensions: 7973
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)