Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0642
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   2.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   4.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   9.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   9.9  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 204 TVSFVPLLSTVMVLYLSPSLINVV 133
           TV  +P++   +VLY +  L NVV
Sbjct: 136 TVYLLPIIINPLVLYEARKLANVV 159


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +2

Query: 113 LLQFKPTTTLIKEGDKYKTITVDSNGTKETVFESGVP 223
           +LQ +P+T+   + D ++   + S+GT     +  +P
Sbjct: 51  ILQVRPSTSAAADVDGWQVTPLPSDGTTSPEPDPEIP 87


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 323 HSKGNTVTP 349
           HS GNTVTP
Sbjct: 12  HSLGNTVTP 20


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 17  MSFLGKKYTFDREENFDGFLKFVGLPEDQIRKL 115
           ++F+   YT  +   FDG       PE++ +K+
Sbjct: 133 LAFVNSAYTLVKAYGFDGLDLAWEFPENKPKKI 165


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
 Frame = +1

Query: 271 VDGNTVTHVVEN-----PNGTATFKREYGDTE 351
           +D N  TH+        PNGT     E+GD E
Sbjct: 48  IDPNICTHINYAFLGVYPNGTLQMIDEWGDIE 79


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 325 MLLCHWDSLQHELRCFHQLCTWFFRQYTIDGFV 227
           MLL H     H L   + LC+ +F   T  G V
Sbjct: 203 MLLWHTFGYYHILAMLNCLCSLWFINCTAKGRV 235


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 325 MLLCHWDSLQHELRCFHQLCTWFFRQYTIDGFV 227
           MLL H     H L   + LC+ +F   T  G V
Sbjct: 203 MLLWHTFGYYHILAMLNCLCSLWFINCTAKGRV 235


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 128 PTTTLIKEGDKYKTITVDSNGTK 196
           P   L +EG+    I +D +GT+
Sbjct: 313 PNVVLDEEGNPCPDIIIDVHGTR 335


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 349 ELKVTISADKWDGVAYRYYKV 411
           +LK+ +S   W+  +Y+Y  V
Sbjct: 92  DLKIILSMGGWNEGSYKYSTV 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,485
Number of Sequences: 336
Number of extensions: 2688
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)