Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0642
(468 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 32 0.18
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 32 0.24
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 31 0.54
U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and en... 29 1.3
AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type tra... 29 1.3
Z68320-3|CAA92707.3| 477|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical ... 28 2.9
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 28 2.9
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 28 2.9
AL110487-6|CAB54433.2| 472|Caenorhabditis elegans Hypothetical ... 28 3.8
AL110482-4|CAB60337.1| 371|Caenorhabditis elegans Hypothetical ... 28 3.8
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 27 5.1
AJ276028-1|CAC81655.1| 816|Caenorhabditis elegans TRP homlogous... 27 5.1
AF040654-5|AAN65302.2| 816|Caenorhabditis elegans Trp (transien... 27 5.1
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 27 5.1
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 27 6.7
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 27 6.7
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 27 6.7
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 27 6.7
U58758-2|AAB93428.1| 424|Caenorhabditis elegans Hypothetical pr... 27 6.7
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 8.9
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 8.9
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 8.9
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.18
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 14 TMSFLGKKYTFDREENFDGFLKFVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGT 193
+ F+G+ + ENF+ ++K VG+ + KPT + EGD + + +
Sbjct: 2 SQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKN 60
Query: 194 KETVFESGVPFDETI-DGVLTK 256
F+ G FDET DG K
Sbjct: 61 TTLSFKLGQEFDETTPDGRTVK 82
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.24
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 23 FLGKKYTFDREENFDGFLKFVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKET 202
F+G+ + ENF+ +LK VG+ + KPT + G+K+ + +
Sbjct: 6 FVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTL 64
Query: 203 VFESGVPFDET 235
F GV FDET
Sbjct: 65 EFTLGVEFDET 75
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 30.7 bits (66), Expect = 0.54
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 110 KLLQFKPTTTLIKEGDKYK-TITVDSNGTKE--TVFESGVPFDETIDGVLTK 256
K+L P T ++ EGD +K +TV N ++GVPFD TI V +
Sbjct: 691 KMLVNDPVTVVMSEGDSFKENLTVRGNPAISLWQWRKNGVPFDHTIGRVFAR 742
>U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and
endoderm determinationprotein 2 protein.
Length = 174
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 36 NTHSIEKKTSMGSLSLSVSPKTRSGNFCSSSLQLH*SRKATNTRPSPSTAT 188
NT++ T+M S SL++SP T S N + H S +T SPST+T
Sbjct: 51 NTYASYYPTAMDSSSLNISPTTGSPNSSHFTTFTHFSTPST----SPSTST 97
>AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type
transcription factor protein.
Length = 174
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 36 NTHSIEKKTSMGSLSLSVSPKTRSGNFCSSSLQLH*SRKATNTRPSPSTAT 188
NT++ T+M S SL++SP T S N + H S +T SPST+T
Sbjct: 51 NTYASYYPTAMDSSSLNISPTTGSPNSSHFTTFTHFSTPST----SPSTST 97
>Z68320-3|CAA92707.3| 477|Caenorhabditis elegans Hypothetical
protein W07A12.6 protein.
Length = 477
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = -1
Query: 249 NTPSMVSSKGTPDSKTVSFVPLLS-TVMVLYLSPSLINVVVGLNCK-SFRIWSSGRPTNL 76
NT S ++S PD+ TV+ PL++ T +V+ S + N++ L+ K S + +GR + L
Sbjct: 8 NTTSCLTSTLLPDTVTVAATPLIAWTALVILGSITSNNILSALSLKRSIKELLTGRSSKL 67
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 14 TMSFLGKKYTFDREENFDGFLKFVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGT 193
TM+ +GK++ + NF F G+P D + L + I E D++ T ++
Sbjct: 229 TMADMGKEWKRTTKHNFRDFWASSGVPLDMLMTFLDREIEAEYIDEDDQFFTGVSETFNV 288
Query: 194 KET 202
K++
Sbjct: 289 KDS 291
>AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical
protein C48E7.2 protein.
Length = 544
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 250 DEKTTYTVDGNTVTHVVENPNGTATFKREYG 342
+ +TTY D + + HV+ +P K YG
Sbjct: 73 NNRTTYVADSDQIQHVISSPRACLIAKTLYG 103
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 28.3 bits (60), Expect = 2.9
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +2
Query: 35 KYTFDREENFDGFLKFVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKETV--- 205
K+ F ENFD +LK VG+ + KP GD++ T++SN T +
Sbjct: 10 KWNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEW---TMNSNSTFKNYTLK 66
Query: 206 FESGVPFDE-TIDG 244
++ G DE T DG
Sbjct: 67 WKLGTASDEKTADG 80
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 28.3 bits (60), Expect = 2.9
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +2
Query: 35 KYTFDREENFDGFLKFVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKETV--- 205
K+ F ENFD +LK VG+ + KP GD++ T++SN T +
Sbjct: 25 KWNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEW---TMNSNSTFKNYTLK 81
Query: 206 FESGVPFDE-TIDG 244
++ G DE T DG
Sbjct: 82 WKLGTASDEKTADG 95
>AL110487-6|CAB54433.2| 472|Caenorhabditis elegans Hypothetical
protein Y39E4B.7 protein.
Length = 472
Score = 27.9 bits (59), Expect = 3.8
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = -1
Query: 282 VSINCVRGFFVNTPSMVSSKGTPDSKTVSFVPLLSTVMVLYLSPSLINVVVGLNCKSFRI 103
+SI+ + FF+ + S T + P L +++L L L V+GL +
Sbjct: 155 LSIHMMYVFFLCFAYVWSGSDTNARDHILSPPYLCAIVLLALCAVLCVPVIGLTVFHLVL 214
Query: 102 WSSGRPTNLRNPSKFSSLSNVY 37
+ GR TN + KF+S N +
Sbjct: 215 VARGRTTNEQVTGKFTSGYNPF 236
>AL110482-4|CAB60337.1| 371|Caenorhabditis elegans Hypothetical
protein Y39G8B.3 protein.
Length = 371
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 124 ELQKFPDLVFGETDKLKEPIEVFFSIECVF 35
EL KFP ++ ++ + + V+F+I CVF
Sbjct: 25 ELLKFPSIILLVSEFMMFVVTVYFAIRCVF 54
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 134 TTLIKEGDKYKTITVDSNGTKETVFE-SGVPFDETIDGVLTKKPR 265
TT +KE + +D+ + +FE SG +DE +DG LT++ R
Sbjct: 588 TTALKEETASE---LDAEEFLDEIFELSGEQYDEVVDGTLTEEDR 629
>AJ276028-1|CAC81655.1| 816|Caenorhabditis elegans TRP homlogous
cation channel proteinprotein.
Length = 816
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 348 GVTVFPFECCCAIGILYNMSYGVSIN 271
G T+F CCC+I +L NM + N
Sbjct: 642 GKTIFGSYCCCSIIVLLNMLIAMMSN 667
>AF040654-5|AAN65302.2| 816|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform a
protein.
Length = 816
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 348 GVTVFPFECCCAIGILYNMSYGVSIN 271
G T+F CCC+I +L NM + N
Sbjct: 642 GKTIFGSYCCCSIIVLLNMLIAMMSN 667
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 348 GVTVFPFECCCAIGILYNMSYGVSIN 271
G T+F CCC+I +L NM + N
Sbjct: 642 GKTIFGSYCCCSIIVLLNMLIAMMSN 667
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 80 FVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKETVFESGVP--FDETIDGVLT 253
FV L E+Q + K +TT D+ + I +DS+ T+E++F V DET +
Sbjct: 390 FVKLLEEQTGLTRKSKWSTTKKTLEDEERYIALDSSSTRESLFREFVANLGDETASDIEE 449
Query: 254 KKPR 265
++ R
Sbjct: 450 EQER 453
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 80 FVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKETVFESGVP--FDETIDGVLT 253
FV L E+Q + K +TT D+ + I +DS+ T+E++F V DET +
Sbjct: 390 FVKLLEEQTGLTRKSKWSTTKKTLEDEERYIALDSSSTRESLFREFVANLGDETASDIEE 449
Query: 254 KKPR 265
++ R
Sbjct: 450 EQER 453
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 80 FVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKETVFESGVP--FDETIDGVLT 253
FV L E+Q + K +TT D+ + I +DS+ T+E++F V DET +
Sbjct: 611 FVKLLEEQTGLTRKSKWSTTKKTLEDEERYIALDSSSTRESLFREFVANLGDETASDIEE 670
Query: 254 KKPR 265
++ R
Sbjct: 671 EQER 674
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 80 FVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKETVFESGVP--FDETIDGVLT 253
FV L E+Q + K +TT D+ + I +DS+ T+E++F V DET +
Sbjct: 602 FVKLLEEQTGLTRKSKWSTTKKTLEDEERYIALDSSSTRESLFREFVANLGDETASDIEE 661
Query: 254 KKPR 265
++ R
Sbjct: 662 EQER 665
>U58758-2|AAB93428.1| 424|Caenorhabditis elegans Hypothetical
protein ZK1127.6 protein.
Length = 424
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 80 FVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKETVFESGVP--FDETIDGVLT 253
FV L E+Q + K +TT D+ + I +DS+ T+E++F V DET +
Sbjct: 120 FVKLLEEQTGLTRKSKWSTTKKTLEDEERYIALDSSSTRESLFREFVANLGDETASDIEE 179
Query: 254 KKPR 265
++ R
Sbjct: 180 EQER 183
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 250 DEKTTYTVDGNTVTHVVENPNGT 318
DE+T+ T D T H+V P+GT
Sbjct: 3577 DEQTSPTEDVGTSVHLVRGPDGT 3599
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 250 DEKTTYTVDGNTVTHVVENPNGT 318
DE+T+ T D T H+V P+GT
Sbjct: 3622 DEQTSPTEDVGTSVHLVRGPDGT 3644
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 250 DEKTTYTVDGNTVTHVVENPNGT 318
DE+T+ T D T H+V P+GT
Sbjct: 3622 DEQTSPTEDVGTSVHLVRGPDGT 3644
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,566,205
Number of Sequences: 27780
Number of extensions: 255735
Number of successful extensions: 938
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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