Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0642
(468 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 46 2e-07
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 46 2e-07
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 39 3e-05
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 28 0.043
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 26 0.23
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.54
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 1.2
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 5.0
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 6.6
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 46.0 bits (104), Expect = 2e-07
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +2
Query: 35 KYTFDREENFDGFLKFVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKETVFES 214
K+ F + NF+ F K +G ++ + +LQ +P+ L K GD++ + + T F+
Sbjct: 5 KFQFVSQNNFEEFAKVLG-DQNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNTYTKTFKM 63
Query: 215 GVPFDETIDGVLTKKPRT 268
VPF+ET+ + +K +T
Sbjct: 64 NVPFEETLPSLPDRKFQT 81
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 46.0 bits (104), Expect = 2e-07
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +2
Query: 35 KYTFDREENFDGFLKFVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKETVFES 214
K+ F + NF+ F K +G ++ + +LQ +P+ L K GD++ + + T F+
Sbjct: 7 KFQFVSQNNFEEFAKVLG-DQNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNTYTKTFKM 65
Query: 215 GVPFDETIDGVLTKKPRT 268
VPF+ET+ + +K +T
Sbjct: 66 NVPFEETLPSLPDRKFQT 83
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 38.7 bits (86), Expect = 3e-05
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 23 FLGKKYTFDREENFDGFLKFVGLPEDQIRKLLQFKPTTTLIKEGDKYKTITVDSNGTKET 202
FLGK+Y ENFD F+K +G+ + P L + Y T E
Sbjct: 4 FLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTEI 63
Query: 203 VFESGVPF-DETIDG 244
F+ G F +ET+DG
Sbjct: 64 KFKLGEEFEEETVDG 78
Score = 33.1 bits (72), Expect = 0.002
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 256 KTTYTVDGNTVTHVVENPNGTATFKREYGDTELKVTISADKWDGVAYRYYKV 411
K+ T+DGN + V + T T +RE+ TE+K + D D + R YK+
Sbjct: 82 KSVCTLDGNKLIQVQKGEKQT-TIEREFSSTEMKAIMKVD--DIICTRVYKI 130
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 28.3 bits (60), Expect = 0.043
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 280 NTVTHVVENPNGTATFKREYGDTELKVTISADKWDGVAYRYY 405
N T++V N N ++ + REY D E K+ + + AY YY
Sbjct: 196 NIETYIV-NTNYSSKYMREYNDPEYKLDYFMEDVELNAYYYY 236
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 25.8 bits (54), Expect = 0.23
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 280 NTVTHVVENPNGTATFKREYGDTELKVTISADKWDGVAYRYY 405
N T++V N N ++ REY D E K+ + + AY YY
Sbjct: 196 NIETYIV-NTNYSSKNMREYNDPEYKLDYFMEDVELNAYYYY 236
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.6 bits (51), Expect = 0.54
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 179 DSNGTKETVFESGVPFDETIDGVLTKKPRTQLMETP 286
D++GTKE E + G+L K +L E P
Sbjct: 333 DTDGTKERTEEVALDRTPVTQGLLRVKKEEELQEAP 368
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 1.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 196 LCTVAVDGDGLVFVAFLDQCSCRLELQKFP 107
L ++ DGD L + + C +EL+ FP
Sbjct: 141 LLRISQDGDILYSMRLTIKAKCPMELRNFP 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 5.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 292 ELRCFHQLCTWFFRQYTID 236
E CF + +W + YT+D
Sbjct: 156 EQTCFMKFGSWTYDGYTVD 174
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 82 KLKEPIEVFFSIECVFFTQERHG 14
K KEP+ VF++ E HG
Sbjct: 81 KFKEPVAVFYASEIAIGLFFLHG 103
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,510
Number of Sequences: 438
Number of extensions: 3154
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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