BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0640
(393 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003782-1|AAO41463.1| 988|Drosophila melanogaster LD44910p pro... 28 5.1
BT003648-1|AAO39652.1| 938|Drosophila melanogaster AT11044p pro... 28 5.1
AY069839-1|AAL39984.1| 624|Drosophila melanogaster SD08625p pro... 28 5.1
AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p pro... 28 5.1
AE014298-3178|AAN09567.1| 337|Drosophila melanogaster CG14619-P... 28 5.1
AE014298-3177|AAN09566.1| 938|Drosophila melanogaster CG14619-P... 28 5.1
AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-P... 28 5.1
AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-P... 28 5.1
AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-P... 28 5.1
AE013599-3969|AAF47284.2| 988|Drosophila melanogaster CG16896-P... 28 5.1
BT010260-1|AAQ23578.1| 1229|Drosophila melanogaster RE28982p pro... 27 6.7
AE014134-1089|AAF52380.2| 2188|Drosophila melanogaster CG11527-P... 27 6.7
AE014296-2946|AAF49313.1| 797|Drosophila melanogaster CG6064-PA... 27 8.9
>BT003782-1|AAO41463.1| 988|Drosophila melanogaster LD44910p protein.
Length = 988
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 96 VRNVELELSIGEINSEIQLNLFGREVGGRISDFLNKLPYNLEKYQSQV-SRVLET--SPN 266
+RN E+EL S+ + G + + D + KL Y ++ Q + +E +P
Sbjct: 892 IRNQEMELLAQRYYSDTE----GAPLAQKYYDKIQKLCYQRDQLQKNLRDMTMEQLRTPA 947
Query: 267 TSSTDFCPDLLMRNNTCF 320
TSS F P L+ N+ F
Sbjct: 948 TSSVQFSPQLVDIENSIF 965
>BT003648-1|AAO39652.1| 938|Drosophila melanogaster AT11044p
protein.
Length = 938
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 280 SVDDVFGDVSKTRLTWDWY 224
++DD D K LTW+WY
Sbjct: 725 NIDDNLSDNKKADLTWEWY 743
>AY069839-1|AAL39984.1| 624|Drosophila melanogaster SD08625p
protein.
Length = 624
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 96 VRNVELELSIGEINSEIQLNLFGREVGGRISDFLNKLPYNLEKYQSQV-SRVLET--SPN 266
+RN E+EL S+ + G + + D + KL Y ++ Q + +E +P
Sbjct: 528 IRNQEMELLAQRYYSDTE----GAPLAQKYYDKIQKLCYQRDQLQKNLRDMTMEQLRTPA 583
Query: 267 TSSTDFCPDLLMRNNTCF 320
TSS F P L+ N+ F
Sbjct: 584 TSSVQFSPQLVDIENSIF 601
>AY069803-1|AAL39948.1| 856|Drosophila melanogaster SD04280p
protein.
Length = 856
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 280 SVDDVFGDVSKTRLTWDWY 224
++DD D K LTW+WY
Sbjct: 643 NIDDNLSDNKKADLTWEWY 661
>AE014298-3178|AAN09567.1| 337|Drosophila melanogaster CG14619-PB,
isoform B protein.
Length = 337
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 280 SVDDVFGDVSKTRLTWDWY 224
++DD D K LTW+WY
Sbjct: 124 NIDDNLSDNKKADLTWEWY 142
>AE014298-3177|AAN09566.1| 938|Drosophila melanogaster CG14619-PC,
isoform C protein.
Length = 938
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 280 SVDDVFGDVSKTRLTWDWY 224
++DD D K LTW+WY
Sbjct: 725 NIDDNLSDNKKADLTWEWY 743
>AE014298-3176|AAN09565.1| 856|Drosophila melanogaster CG14619-PE,
isoform E protein.
Length = 856
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 280 SVDDVFGDVSKTRLTWDWY 224
++DD D K LTW+WY
Sbjct: 643 NIDDNLSDNKKADLTWEWY 661
>AE014298-3175|AAN09564.1| 856|Drosophila melanogaster CG14619-PD,
isoform D protein.
Length = 856
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 280 SVDDVFGDVSKTRLTWDWY 224
++DD D K LTW+WY
Sbjct: 643 NIDDNLSDNKKADLTWEWY 661
>AE014298-3174|AAF50952.2| 856|Drosophila melanogaster CG14619-PA,
isoform A protein.
Length = 856
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 280 SVDDVFGDVSKTRLTWDWY 224
++DD D K LTW+WY
Sbjct: 643 NIDDNLSDNKKADLTWEWY 661
>AE013599-3969|AAF47284.2| 988|Drosophila melanogaster CG16896-PA
protein.
Length = 988
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 96 VRNVELELSIGEINSEIQLNLFGREVGGRISDFLNKLPYNLEKYQSQV-SRVLET--SPN 266
+RN E+EL S+ + G + + D + KL Y ++ Q + +E +P
Sbjct: 892 IRNQEMELLAQRYYSDTE----GAPLAQKYYDKIQKLCYQRDQLQKNLRDMTMEQLRTPA 947
Query: 267 TSSTDFCPDLLMRNNTCF 320
TSS F P L+ N+ F
Sbjct: 948 TSSVQFSPQLVDIENSIF 965
>BT010260-1|AAQ23578.1| 1229|Drosophila melanogaster RE28982p
protein.
Length = 1229
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 126 GEINSEIQLNLFGREVGGRISDFLNKLPYNLEKYQSQVSR 245
G++ E QLN + + R+ D +NK ++E+ +S++S+
Sbjct: 845 GQLRMESQLNNWQKIERQRLLDLINKNNLSIEEIESKISK 884
>AE014134-1089|AAF52380.2| 2188|Drosophila melanogaster CG11527-PA
protein.
Length = 2188
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 126 GEINSEIQLNLFGREVGGRISDFLNKLPYNLEKYQSQVSR 245
G++ E QLN + + R+ D +NK ++E+ +S++S+
Sbjct: 845 GQLRMESQLNNWQKIERQRLLDLINKNNLSIEEIESKISK 884
>AE014296-2946|AAF49313.1| 797|Drosophila melanogaster CG6064-PA
protein.
Length = 797
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 207 PYNLEKYQSQVSRVLETSPNTSSTDFCPDLLMRNN 311
PYN K+ + V R L+ N ++T PDL N
Sbjct: 269 PYNNAKFTNPVFRPLQDQVNFANTGSLPDLTALQN 303
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,386,444
Number of Sequences: 53049
Number of extensions: 243799
Number of successful extensions: 783
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -