Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0640
(393 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 23 0.95
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 5.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 20 8.8
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 8.8
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 20 8.8
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 23.4 bits (48), Expect = 0.95
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 264 NTSSTDFCPDLLMRNNTCFIYKHSLQFENKMFSY*KKQFAKKK 392
N ++ FC DL + +T +Y S F+ +FS K AKK+
Sbjct: 341 NNTTMVFCNDLSIDRSTNTMYVLSDNFQQLLFS---KYDAKKR 380
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 216 LEKYQSQVSRVLETSPNTSSTDFCPDLL 299
L K + + RVL P T+S + D++
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDII 152
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 216 LEKYQSQVSRVLETSPNTSSTDFCPDLL 299
L K + + RVL P T+S + D++
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDII 152
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 216 LEKYQSQVSRVLETSPNTSSTDFCPDLL 299
L K + + RVL P T+S + D++
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDII 152
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 216 LEKYQSQVSRVLETSPNTSSTDFCPDLL 299
L K + + RVL P T+S + D++
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDII 152
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 216 LEKYQSQVSRVLETSPNTSSTDFCPDLL 299
L K + + RVL P T+S + D++
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDII 152
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 5.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 216 LEKYQSQVSRVLETSPNTSSTDFCPDLL 299
L K + + RVL P T+S + D++
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDII 152
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 5.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 216 LEKYQSQVSRVLETSPNTSSTDFCPDLL 299
L K + + RVL P T+S + D++
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDII 152
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 98 DGVSVNTDSD 69
DGVS+N DSD
Sbjct: 977 DGVSLNLDSD 986
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 20.2 bits (40), Expect = 8.8
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 116 LKFDVPDGVSVNTDSDN 66
+ FD D + VN DN
Sbjct: 174 INFDKYDNIQVNVSGDN 190
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.2 bits (40), Expect = 8.8
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 209 LQLRKIPIPGQP 244
L+LR +PI G+P
Sbjct: 95 LELRDLPISGKP 106
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 20.2 bits (40), Expect = 8.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 272 INRLLSRPSDAQ*YLF 319
+NR P+DAQ Y+F
Sbjct: 227 LNRTHGFPNDAQPYIF 242
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,102
Number of Sequences: 438
Number of extensions: 1620
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9638226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -