Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0640
         (393 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g29000.1 68415.m03527 leucine-rich repeat family protein / pr...    27   4.5  
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr...    26   7.9  
At3g07160.1 68416.m00853 glycosyl transferase family 48 protein ...    26   7.9  
At2g41210.1 68415.m05089 phosphatidylinositol-4-phosphate 5-kina...    26   7.9  

>At2g29000.1 68415.m03527 leucine-rich repeat family protein /
           protein kinase family protein contains Pfam domains
           PF00560: Leucine Rich Repeat and PF00069: Protein kinase
           domain
          Length = 872

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 231 SQVSRVLETSPNTSSTDFCPDLLMR 305
           SQ+  +L TSPN     FC   L+R
Sbjct: 308 SQIDTLLNTSPNKCDNTFCKAFLVR 332


>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
           protein kinase family protein contains similarity to
           Swiss-Prot:P47735 receptor-like protein kinase 5
           precursor [Arabidopsis thaliana]; contains Pfam domains
           PF00560: Leucine Rich Repeat and PF00069: Protein kinase
           domain
          Length = 1005

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 111 LELSIGEINSEIQLNLFGREVGGRISDFLNKLP 209
           + +SIG +     LNLF  ++ G I   + KLP
Sbjct: 298 IPVSIGNLTKLQVLNLFNNKLTGEIPPVIGKLP 330


>At3g07160.1 68416.m00853 glycosyl transferase family 48 protein
           similar to glucan synthase GB:AAD11794 [Filobasidiella
           neoformans var. neoformans]
          Length = 1931

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 162 GREVGGRISDFLNKLPYNLEKYQSQV 239
           GR +  R SDF+N LP N   Y + V
Sbjct: 646 GRGMYERTSDFINLLPINFNDYYTVV 671


>At2g41210.1 68415.m05089 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 772

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 13/54 (24%), Positives = 31/54 (57%)
 Frame = +3

Query: 102 NVELELSIGEINSEIQLNLFGREVGGRISDFLNKLPYNLEKYQSQVSRVLETSP 263
           +V+  +S+G   +  ++N++G E+G   +D   +L   L +  ++  + L++SP
Sbjct: 307 SVDGRVSVGVDRAFEKMNMWGNEIGEGGADMRKELDAELMRLDAEGLQSLKSSP 360


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,884,926
Number of Sequences: 28952
Number of extensions: 116438
Number of successful extensions: 395
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 567552648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)