Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0639
         (630 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142637-1|AAI42638.1|  595|Homo sapiens hypothetical protein MG...    32   1.9  
BC141828-1|AAI41829.1|  595|Homo sapiens hypothetical protein MG...    32   1.9  
BC014252-1|AAH14252.2|  495|Homo sapiens MGC20983 protein protein.     32   1.9  

>BC142637-1|AAI42638.1|  595|Homo sapiens hypothetical protein
           MGC20983 protein.
          Length = 595

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +3

Query: 222 LNGRR*YKNQIQHLEESLIRTRCKQQYF 305
           LN R   KNQ+Q+LEE+L+R R K++ +
Sbjct: 273 LNARDIAKNQLQYLEETLVRERKKRERY 300


>BC141828-1|AAI41829.1|  595|Homo sapiens hypothetical protein
           MGC20983 protein.
          Length = 595

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +3

Query: 222 LNGRR*YKNQIQHLEESLIRTRCKQQYF 305
           LN R   KNQ+Q+LEE+L+R R K++ +
Sbjct: 273 LNARDIAKNQLQYLEETLVRERKKRERY 300


>BC014252-1|AAH14252.2|  495|Homo sapiens MGC20983 protein protein.
          Length = 495

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +3

Query: 222 LNGRR*YKNQIQHLEESLIRTRCKQQYF 305
           LN R   KNQ+Q+LEE+L+R R K++ +
Sbjct: 173 LNARDIAKNQLQYLEETLVRERKKRERY 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,863,522
Number of Sequences: 237096
Number of extensions: 1447259
Number of successful extensions: 1969
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1969
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)