Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0639
(630 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 2.4
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 23 2.4
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 2.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 3.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 7.5
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 492 SVDIYDNVLEMNSELNIKWE 433
S+D Y N+L+ EL +WE
Sbjct: 160 SMDGYQNILDKKDELLGEWE 179
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 492 SVDIYDNVLEMNSELNIKWE 433
S+D Y N+L+ EL +WE
Sbjct: 160 SMDGYQNILDKKDELLGEWE 179
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 492 SVDIYDNVLEMNSELNIKWE 433
S+D Y N+L+ EL +WE
Sbjct: 160 SMDGYQNILDKKDELLGEWE 179
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 5 NCGFLYEQYEYTNQYKIHLTTCQIKSITLEGEILTDKIIILLNI 136
N + + Y +QY + C+IK+ ++ E L ++ I ++I
Sbjct: 448 NLNHMMREEFYQSQYGDPINNCEIKAGEIDAERLNNQGIESIDI 491
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 445 YKVGNKYNYIENYVYNYQ 392
YK N NY NY NY+
Sbjct: 89 YKYSNYNNYNNNYNTNYK 106
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 445 YKVGNKYNYIENYVYNYQ 392
YK N NY NY NY+
Sbjct: 89 YKYSNYNNYNNNYNTNYK 106
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 445 YKVGNKYNYIENYVYNYQ 392
YK N NY NY NY+
Sbjct: 89 YKYSNYNNYNNNYNTNYK 106
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 445 YKVGNKYNYIENYVYNYQ 392
YK N NY NY NY+
Sbjct: 89 YKYSNYNNYNNNYNTNYK 106
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 445 YKVGNKYNYIENYVYNYQ 392
YK N NY NY NY+
Sbjct: 89 YKYSNYNNYNNNYNTNYK 106
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 445 YKVGNKYNYIENYVYNYQ 392
YK N NY NY NY+
Sbjct: 89 YKYSNYNNYNNNYNTNYK 106
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 445 YKVGNKYNYIENYVYNYQ 392
YK N NY NY NY+
Sbjct: 89 YKYSNYNNYNNNYNTNYK 106
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 445 YKVGNKYNYIENYVYNY 395
YK N NY NY NY
Sbjct: 89 YKYSNYNNYNNNYNNNY 105
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 445 YKVGNKYNYIENYVYNY 395
YK N NY NY NY
Sbjct: 89 YKYSNYNNYNNNYNNNY 105
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.5
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 32 EYTNQYKIHLTTCQIKSITLEGEILTDKIIILLNI 136
+Y NQ H T+ Q L G + + ++LL++
Sbjct: 114 QYKNQNNNHYTSHQHLRTHLRGTLTVNVSVLLLSL 148
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.5
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 611 KSKV-KLV*NKENNLILNLFTSQYTPIH 531
KSK K++ + NN N + + Y P+H
Sbjct: 308 KSKEPKIISSLSNNYNYNNYNNNYKPLH 335
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,314
Number of Sequences: 438
Number of extensions: 3485
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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