Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0634
(464 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein. 34 0.21
M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein ... 34 0.21
M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID ... 34 0.21
CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein. 34 0.21
BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protei... 34 0.21
BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protei... 34 0.21
BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protei... 34 0.21
AL031259-7|CAD92544.1| 151|Homo sapiens TATA box binding protei... 34 0.21
AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protei... 34 0.21
AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protei... 34 0.21
AB051470-1|BAB21774.1| 832|Homo sapiens KIAA1683 protein protein. 34 0.28
X82209-1|CAA57693.2| 1319|Homo sapiens MN1 protein protein. 33 0.64
AL390210-1|CAI17971.2| 1320|Homo sapiens meningioma (disrupted i... 33 0.64
AL031591-1|CAI20309.2| 1320|Homo sapiens meningioma (disrupted i... 33 0.64
EF540994-1|ABQ01232.1| 1322|Homo sapiens meningioma (disrupted i... 31 2.0
AK127825-1|BAC87149.1| 207|Homo sapiens PROTEIN). protein. 31 2.6
BC012946-1|AAH12946.1| 615|Homo sapiens RGNEF protein protein. 29 6.0
AK025816-1|BAB15243.1| 669|Homo sapiens protein ( Homo sapiens ... 29 6.0
U93868-1|AAB63676.1| 233|Homo sapiens RNA polymerase III subuni... 29 7.9
AK025470-1|BAB15141.1| 651|Homo sapiens protein ( Homo sapiens ... 29 7.9
AF321609-1|AAT09768.1| 834|Homo sapiens titin protein. 29 7.9
>X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein.
Length = 335
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein
protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID
protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protein
protein.
Length = 336
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>AL031259-7|CAD92544.1| 151|Homo sapiens TATA box binding protein
protein.
Length = 151
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protein
protein.
Length = 208
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protein
protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 327 FTLMMIWTRGVPSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
F+ MM + G+ P+ T + S + QQR ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 28 FSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
>AB051470-1|BAB21774.1| 832|Homo sapiens KIAA1683 protein protein.
Length = 832
Score = 33.9 bits (74), Expect = 0.28
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 75 EPISVGPALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPA 254
+P P+L I V P L + I V P+L + I V P+L + I V P
Sbjct: 356 QPTGESPSLTQPSLTIRVSPCLAMSSQTIGVSPSLAMPSQTIGVSPSLAMPFHTIGVSPT 415
Query: 255 L 257
L
Sbjct: 416 L 416
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 81 ISVGPALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPAL 257
I V P L + + I V P+L I V P+L + I V P L I P+L
Sbjct: 371 IRVSPCLAMSSQTIGVSPSLAMPSQTIGVSPSLAMPFHTIGVSPTLAHPSMAIRESPSL 429
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +3
Query: 72 YEPISVG--PALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISV 245
Y SVG P L ++P V P+ I P L ++P V P+ Y+ V
Sbjct: 80 YPSQSVGEYPMLAQPFQPTEVSPSPTYPSQAIREYPTLAQPFQPTEVSPSPAHPYQLTEV 139
Query: 246 GPA 254
P+
Sbjct: 140 SPS 142
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 93 PALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGP 212
P L ++P V P+ Y V P+ +Y+P V P
Sbjct: 115 PTLAQPFQPTEVSPSPAHPYQLTEVSPSAAYSYQPTEVSP 154
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +3
Query: 75 EPISVGPALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPA 254
+ I V P+L + I V P+L + I V P L I P+L + P+
Sbjct: 382 QTIGVSPSLAMPSQTIGVSPSLAMPFHTIGVSPTLAHPSMAIRESPSLAQPPQSTGESPS 441
Query: 255 L 257
L
Sbjct: 442 L 442
>X82209-1|CAA57693.2| 1319|Homo sapiens MN1 protein protein.
Length = 1319
Score = 32.7 bits (71), Expect = 0.64
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = -3
Query: 294 PSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
PS P AP + +QQ+ ++ QQ+Q +++ ++ QQ+Q QQR
Sbjct: 506 PSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQR 550
>AL390210-1|CAI17971.2| 1320|Homo sapiens meningioma (disrupted in
balanced translocation) 1 protein.
Length = 1320
Score = 32.7 bits (71), Expect = 0.64
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = -3
Query: 294 PSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
PS P AP + +QQ+ ++ QQ+Q +++ ++ QQ+Q QQR
Sbjct: 507 PSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQR 551
>AL031591-1|CAI20309.2| 1320|Homo sapiens meningioma (disrupted in
balanced translocation) 1 protein.
Length = 1320
Score = 32.7 bits (71), Expect = 0.64
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = -3
Query: 294 PSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
PS P AP + +QQ+ ++ QQ+Q +++ ++ QQ+Q QQR
Sbjct: 507 PSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQR 551
>EF540994-1|ABQ01232.1| 1322|Homo sapiens meningioma (disrupted in
balanced translocation) 1 protein.
Length = 1322
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -3
Query: 294 PSAPVTVTGAPSTRQVQQRWARRCQQEQVRRRWARRCQQEQVQQR 160
PS P AP + +QQ+ ++ QQ+Q +++ ++ QQ+Q QQ+
Sbjct: 507 PSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 551
>AK127825-1|BAC87149.1| 207|Homo sapiens PROTEIN). protein.
Length = 207
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 89 WTCSC*HLRTHLCW---TCSC*HLRAHLCWTCSC*HLRAHLRRTCSC*HLRAHLCWT 250
W C+C ++ +H+C C C L ++C C C +R H+R L+A + W+
Sbjct: 125 WVCACTYVCSHVCMCGCVCMCMCLYVYMC-MCVC--VRVHVRSREE--QLKAGVVWS 176
>BC012946-1|AAH12946.1| 615|Homo sapiens RGNEF protein protein.
Length = 615
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 222 QQEQVRRRWARRCQQEQVQQ 163
Q +Q +RRW RRC+Q+Q Q
Sbjct: 410 QLQQEQRRWLRRCEQQQRAQ 429
>AK025816-1|BAB15243.1| 669|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22163 fis, clone HRC00430. ).
Length = 669
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 222 QQEQVRRRWARRCQQEQVQQ 163
Q +Q +RRW RRC+Q+Q Q
Sbjct: 410 QLQQEQRRWLRRCEQQQRAQ 429
>U93868-1|AAB63676.1| 233|Homo sapiens RNA polymerase III subunit
protein.
Length = 233
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 380 EPLPEVVILPTPVFPEIDVPEPVEL 454
E LP+VV+ P P+FP+ D +PV L
Sbjct: 25 EKLPDVVLKPPPLFPDTDY-KPVPL 48
>AK025470-1|BAB15141.1| 651|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21817 fis, clone HEP01141. ).
Length = 651
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 222 QQEQVRRRWARRCQQEQVQQ 163
Q +Q +RRW RRC+Q+Q Q
Sbjct: 366 QLQQGQRRWLRRCEQQQRAQ 385
>AF321609-1|AAT09768.1| 834|Homo sapiens titin protein.
Length = 834
Score = 29.1 bits (62), Expect = 7.9
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 260 EGAPVTVTGADGTPLVQIIINVNRPSEIAADPVDVEDIAEEPLPE-VVILPTPVFPEIDV 436
E PVTV A +++ + P + PV V + +E +PE V +P P PE+
Sbjct: 615 EVPPVTVPEAPKEVVLEKKVPSTPPKKPEVPPVKVPEAPKEVVPEKKVPVPPPKKPEVPP 674
Query: 437 PEPVELP 457
+ E+P
Sbjct: 675 TKVPEVP 681
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,033,953
Number of Sequences: 237096
Number of extensions: 1464454
Number of successful extensions: 6466
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5840
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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