Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0633
         (558 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E487BF Cluster: PREDICTED: similar to Eukaryotic...    34   2.6  
UniRef50_Q7RP76 Cluster: Putative uncharacterized protein PY0158...    33   3.4  
UniRef50_A4SAJ9 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   4.5  
UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila melanogaste...    33   4.5  

>UniRef50_UPI0000E487BF Cluster: PREDICTED: similar to Eukaryotic
           translation initiation factor 2-alpha kinase 4
           (GCN2-like protein); n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to Eukaryotic
           translation initiation factor 2-alpha kinase 4
           (GCN2-like protein) - Strongylocentrotus purpuratus
          Length = 1517

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = -2

Query: 374 GVDGSNDDGLRDNGALFSLF-----DDNNGLGLDFSGSNRNTSGDLTFTMS 237
           G+ G +DD   D+  +F        DD++  G+DF GSNR    D++ ++S
Sbjct: 615 GLIGDSDDSSSDDEGVFGRSFLPRSDDSSSDGIDFEGSNRGEESDISLSIS 665


>UniRef50_Q7RP76 Cluster: Putative uncharacterized protein PY01583;
           n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01583 - Plasmodium yoelii yoelii
          Length = 1269

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 386 DNRGGVDGSNDDGLRDNGALFSLFDDNNGLGLDFSGSNRNTSGD 255
           +N G   G+NDD   DNG+  S   +N+G   D +GSN N + D
Sbjct: 626 NNSGHSGGNNDDNSGDNGS--SRDSNNDGSNDDDNGSNNNNNDD 667


>UniRef50_A4SAJ9 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 376

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -2

Query: 392 LRDNRGGVDGSNDDGLRDNGALFSLFDDNN 303
           +R + GGV+GS  DG RDNGA     DD++
Sbjct: 157 VRGDAGGVEGSRTDGERDNGASAGEDDDDD 186


>UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila
           melanogaster|Rep: CG32241-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 440

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 10  KMKFLVAFALIAVASARVFEPISVGPALVDT---YEPIDTEPAYVDIP 144
           K KFL+AFAL+AVASA V    S    L +    Y P  + P  +D+P
Sbjct: 25  KQKFLIAFALVAVASADVSHLFSNSNNLQEDGYHYAP-PSAPVVIDVP 71


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,528,264
Number of Sequences: 1657284
Number of extensions: 3924941
Number of successful extensions: 14235
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14197
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)