Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0632
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.82 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.3  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    22   4.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 63   VRFGALAPRVPPPT-SWWIAPKEFSTSMKLR 152
            V    LA  +PPP  +W I   +F+TS K+R
Sbjct: 1324 VTLPCLAVGLPPPVITWKIKGVQFTTSDKIR 1354


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -2

Query: 148 NFIEVLNSFGAIHQDVGGGTLGAKAPNLTGFG 53
           N ++ +N+    +Q  G   +G  AP+   FG
Sbjct: 325 NHMQAMNNMAGTYQMTGYSAMGMAAPHHQNFG 356


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 119 SKGVQYLNEIKDSVVAGFQ 175
           SK ++Y+N + D  VAGF+
Sbjct: 183 SKIIEYMNHLVDLGVAGFR 201


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 119 SKGVQYLNEIKDSVVAGFQ 175
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 119 SKGVQYLNEIKDSVVAGFQ 175
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 448 VAGTPMFIVKAYLPVNESFGLLPICVPTPADRPSRSAYSTIGRSSLE-TRANLRASPTT 621
           ++GT   I+ A     +S  + P  VPTP  +P+++  S   ++S + T ++    P T
Sbjct: 371 LSGTKYQILNAINAALKSDEIPPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQT 429


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 666 GDLPSILSSFSFPVQRCRACSEVRTGLQGGPANGR 562
           G +P+   S  +P++R R   + R  +Q G  +GR
Sbjct: 53  GPIPT--KSSKYPIKRKRVRFQTRVKVQEGSKSGR 85


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 115 IHQDVGGGTLGAKAPN 68
           I Q VGGGT+G+   N
Sbjct: 653 IRQCVGGGTIGSNQRN 668


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 469 IVKAYLPVNESFGLLPIC 522
           ++K  + + + FG LP+C
Sbjct: 14  VIKPLINLTKIFGFLPVC 31


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 477 LHNEHRCTCHLGLF 436
           +H  H+CTC  G +
Sbjct: 356 IHAGHKCTCPEGFY 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,826
Number of Sequences: 336
Number of extensions: 4718
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)