Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0632
(719 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 137 9e-33
02_04_0017 + 18937774-18937864,18938505-18940945 137 9e-33
01_06_0662 + 30987187-30987277,30987825-30990214 135 3e-32
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 120 9e-28
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 109 2e-24
02_04_0148 - 20198407-20201424 70 2e-12
03_05_0511 + 25056018-25059107 69 5e-12
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 43 2e-04
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 39 0.003
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 35 0.075
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 32 0.53
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 32 0.53
07_03_1279 + 25415971-25416540 30 1.6
01_04_0109 + 16112581-16112934 30 1.6
10_01_0360 - 3970796-3971248,3972080-3972436 30 2.1
06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027 29 4.9
11_03_0146 + 10744403-10744603,10745199-10745834,10745967-107461... 28 6.5
05_04_0357 + 20602830-20602848,20604210-20604250,20605770-206065... 28 6.5
06_01_0707 + 5136210-5136584 28 8.6
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 28 8.6
01_06_0456 + 29521282-29522064 28 8.6
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 137 bits (331), Expect = 9e-33
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +1
Query: 256 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 435
DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVF
Sbjct: 697 DAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVF 756
Query: 436 EESQVAGTPMFIVKAYLPVNESFG 507
EE Q GTP++ +KAYLPV ESFG
Sbjct: 757 EEMQRPGTPLYNIKAYLPVIESFG 780
Score = 124 bits (299), Expect = 7e-29
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +2
Query: 2 DFKTRARYLTEKYEYDVTEARKIWCFGPEGTAPNILVDCSKGVQYLNEIKDSVVAGFQWA 181
D K R++ L+E++ +D A+KIWCFGPE T PN++VD KGVQYLNEIKDSVVAGFQWA
Sbjct: 612 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 671
Query: 182 AKEGVMAEENLRGVRFNIYDVTLH 253
+KEG +AEEN+RG+ F + DV LH
Sbjct: 672 SKEGALAEENMRGICFEVCDVVLH 695
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/63 (52%), Positives = 44/63 (69%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYL 686
F++ LR+ T GQAFPQCVFDHW ++ DP E S+ +V + RKRKGLKE + L+ +
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLKEQMTPLSDFE 840
Query: 687 DKL 695
DKL
Sbjct: 841 DKL 843
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 137 bits (331), Expect = 9e-33
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = +1
Query: 256 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 435
DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVF
Sbjct: 697 DAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVF 756
Query: 436 EESQVAGTPMFIVKAYLPVNESFG 507
EE Q GTP++ +KAYLPV ESFG
Sbjct: 757 EEMQRPGTPLYNIKAYLPVIESFG 780
Score = 124 bits (299), Expect = 7e-29
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +2
Query: 2 DFKTRARYLTEKYEYDVTEARKIWCFGPEGTAPNILVDCSKGVQYLNEIKDSVVAGFQWA 181
D K R++ L+E++ +D A+KIWCFGPE T PN++VD KGVQYLNEIKDSVVAGFQWA
Sbjct: 612 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 671
Query: 182 AKEGVMAEENLRGVRFNIYDVTLH 253
+KEG +AEEN+RG+ F + DV LH
Sbjct: 672 SKEGALAEENMRGICFEVCDVVLH 695
Score = 78.6 bits (185), Expect = 5e-15
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYL 686
F++ LR+ T GQAFPQCVFDHW ++ DP E S+ +VQ+ RKRKGLKE + L+ +
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKGLKEQMTPLSDFE 840
Query: 687 DKL 695
DKL
Sbjct: 841 DKL 843
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 135 bits (327), Expect = 3e-32
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +1
Query: 256 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 435
DAIHRGGGQIIPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIY VLN++RGHVF
Sbjct: 695 DAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVF 754
Query: 436 EESQVAGTPMFIVKAYLPVNESFG 507
EE Q GTP++ +KAYLPV ESFG
Sbjct: 755 EEMQRPGTPLYNIKAYLPVIESFG 778
Score = 120 bits (288), Expect = 2e-27
Identities = 55/86 (63%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 DFKTRARYLTEKYEYDVTEARKIWCFGPEGTAPNILVDCSKGVQYLNEIKDSVVAGFQWA 181
D K R++ L+E++ +D A+KIWCFGPE T PNI+VD KGVQYLNEIKDSVVAGFQWA
Sbjct: 608 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNIVVDMCKGVQYLNEIKDSVVAGFQWA 667
Query: 182 AKEGVMAEENL--RGVRFNIYDVTLH 253
+KEG +AEEN+ RG+ F + DV LH
Sbjct: 668 SKEGALAEENMRGRGICFEVCDVILH 693
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSK 611
FT+ LR+ T GQAFP VFDHW++L DP EP ++
Sbjct: 779 FTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTR 813
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 120 bits (290), Expect = 9e-28
Identities = 54/84 (64%), Positives = 66/84 (78%)
Frame = +2
Query: 2 DFKTRARYLTEKYEYDVTEARKIWCFGPEGTAPNILVDCSKGVQYLNEIKDSVVAGFQWA 181
D K R + L+E++ +D A+KIW FGPE PN+LVD KGVQYL+EIKDSVVAGFQWA
Sbjct: 622 DIKERGKILSEEFGWDKDLAKKIWAFGPETKGPNLLVDMCKGVQYLSEIKDSVVAGFQWA 681
Query: 182 AKEGVMAEENLRGVRFNIYDVTLH 253
+KEG +AEEN+RGV F + DVTLH
Sbjct: 682 SKEGALAEENMRGVCFELCDVTLH 705
Score = 112 bits (269), Expect = 3e-25
Identities = 50/83 (60%), Positives = 63/83 (75%)
Frame = +1
Query: 256 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 435
D+IHRGGGQ+IPT RR +YA LTA PRLMEP+Y +IQ P+ AVG +YGVLN R G +
Sbjct: 707 DSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELV 766
Query: 436 EESQVAGTPMFIVKAYLPVNESF 504
EES+ GTP+ ++ YLPV +SF
Sbjct: 767 EESERTGTPLSNLRFYLPVAKSF 789
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYL 686
FT LR+ T GQAFPQC+F HWQ + DP + S+ V+ + RKRKGLK+ + L+ Y
Sbjct: 791 FTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLKDIITPLSDYE 850
Query: 687 DKL 695
DKL
Sbjct: 851 DKL 853
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 109 bits (263), Expect = 2e-24
Identities = 52/88 (59%), Positives = 62/88 (70%)
Frame = +1
Query: 244 NTPYDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRR 423
N + +HRGGGQIIPT RR +Y+ L A PRLMEPVY EIQ P V IY VL+RRR
Sbjct: 819 NIAPEPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRR 878
Query: 424 GHVFEESQVAGTPMFIVKAYLPVNESFG 507
GHV + GTP+++VKA+LPV ESFG
Sbjct: 879 GHVTADVPKPGTPIYVVKAFLPVIESFG 906
Score = 81.0 bits (191), Expect = 9e-16
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Frame = +2
Query: 23 YLTEKYEYDVTEARKIWCFGPEGTAPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKE 190
+ ++Y++DV AR IW FGPE PNIL+D + V+ LN +KDS+V GFQW A+E
Sbjct: 741 FFRQRYQWDVLAARSIWAFGPEKQGPNILLDDTLSVEVDKNLLNAVKDSIVQGFQWGARE 800
Query: 191 GVMAEENLRGVRFNIYDVTLHMMP 262
G + +E +R V+F I + + P
Sbjct: 801 GPLCDEPIRNVKFKILNANIAPEP 824
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGD---------PCEP---QSKPYNVVQETRKRKG 650
F DLR +T GQAF VFDHW ++PGD P EP Q + +TR+RKG
Sbjct: 907 FETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVKTRRRKG 966
Query: 651 LKEGLPDLTQYLDK 692
+ E + + ++ D+
Sbjct: 967 MSEDV-SINKFFDE 979
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/86 (40%), Positives = 45/86 (52%)
Frame = +1
Query: 244 NTPYDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRR 423
N D GQII R A +L ++PRL+EP+Y CE+ P +G +Y VL R
Sbjct: 832 NNQSDHYSTFSGQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCR 891
Query: 424 GHVFEESQVAGTPMFIVKAYLPVNES 501
V +E GT +F V AYL V ES
Sbjct: 892 ARVLKEEMQEGTSLFTVHAYLSVAES 917
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDP 593
F+ LR+ T G A F HW+ +P DP
Sbjct: 920 FSKKLRNATAGAASALLAFSHWETVPQDP 948
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/77 (40%), Positives = 44/77 (57%)
Frame = +1
Query: 277 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 456
GQ+I + ++ +PRL+E +Y CE+ P +G Y VL+R+R V +E G
Sbjct: 867 GQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEG 926
Query: 457 TPMFIVKAYLPVNESFG 507
T +F V AYLPV ES G
Sbjct: 927 TSLFTVHAYLPVAESVG 943
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 501 VRFTADLRSNTGGQAFPQCVFDHWQVLPGDP 593
V F+ +LRS T G A V HW+ +P DP
Sbjct: 942 VGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +1
Query: 319 LLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNE 498
L A PRL+EP+ E+ PE +G + G LN RRG V G + +V A++P+ E
Sbjct: 644 LRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAE 702
Query: 499 SF 504
F
Sbjct: 703 MF 704
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +1
Query: 316 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 495
C A+P ++EPV E++ P G + G +N+R+G + Q +V ++P+N
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLN 722
Query: 496 ESFG 507
FG
Sbjct: 723 NMFG 726
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 34.7 bits (76), Expect = 0.075
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 511 LPICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGKD 651
+P +P P D PS+ +T G S+ +N SP+ +Y K G D
Sbjct: 24 VPGVIPKPIDLPSQRGTATQGDKSMPPASNAWGSPSVMYPKNGGGSD 70
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 256 HMECYIIDVESNTTQILFSHNSFLSGPLESSHNRVLNFIEVLNSFGAIHQ 107
H Y I++ I+ S+N L G LES H+R L+ V A+H+
Sbjct: 640 HWSLYAINIAHRRVDIMDSNNYNLIGTLESDHHRALSKRIVKRLSDALHE 689
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 325 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 504
T +L EP + ++ PE +G + +L +RRG + + ++K +P
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556
Query: 505 GL 510
GL
Sbjct: 557 GL 558
>07_03_1279 + 25415971-25416540
Length = 189
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 379 EVAVGGIYGVLNRRRGHVFEESQVAG-TPMFIVKAYLPVNESFGLLPICVPTPADRPSRS 555
+VA G L R R ++ E A T + +V + L NE+FG + + D P R+
Sbjct: 28 DVAAAGGRDKLTRIRVYMHERFAGANATALAVVPSPLGANEAFGRVAVLDDELRDGPDRA 87
Query: 556 AYSTIGR 576
+ + IGR
Sbjct: 88 SSALIGR 94
>01_04_0109 + 16112581-16112934
Length = 117
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1
Query: 517 ICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGK 648
+ +P+PA R R+ +T R++ +++ R PTT +R +G+
Sbjct: 11 VLLPSPAQRRIRATAATHQRTANNHQSDARTKPTTAGSRRRQGR 54
>10_01_0360 - 3970796-3971248,3972080-3972436
Length = 269
Score = 29.9 bits (64), Expect = 2.1
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Frame = +1
Query: 280 QIIPTTRR--CLYACLLTAQPRLMEPVYLC--EIQCPEVAVGGIYGVLNRRRGHVFEESQ 447
Q IP RR + AQ RL +PVY C I + V G+ LN +GH+ +
Sbjct: 80 QQIPAHRRLDAVVTICYEAQARLRDPVYGCVAHIFHLQHQVAGLQSELNYLQGHL-STME 138
Query: 448 VAGTPMFIVKAYLPVNESFGLLPICVPTP---ADRPSRSAYSTIGRSSLET 591
+ P ++ L + L+P+ +D PS SA + + L T
Sbjct: 139 LPSPPPYVAGPTLAPPQPQPLMPMTAAANFNFSDLPSSSAANIPVTADLST 189
>06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027
Length = 178
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 60 PVRFGALAPRVPPPTSWWIAPKEFSTSMKLRTLLWLDSSGPLRK 191
P R PR+ PTS + P+E +T+ + W D G +R+
Sbjct: 58 PARLRVARPRIQRPTSSHVEPEEVTTASR-----WRDGRGSVRR 96
>11_03_0146 +
10744403-10744603,10745199-10745834,10745967-10746125,
10746398-10747036,10748018-10748151,10748281-10748464,
10748882-10749217,10751659-10751945,10752863-10753253,
10753351-10753615,10753740-10753818,10754123-10754543
Length = 1243
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 256 HMECYIIDVESNTTQILFSHNSFLSGPLESSHNRVLNFIEVLNSFGAIHQ 107
H Y I++ I+ S+N L G LES H+ L+ + A+H+
Sbjct: 661 HWSLYAINIAHGRVDIMDSNNYNLIGTLESDHHCALSKRIIKRLSDALHE 710
>05_04_0357 +
20602830-20602848,20604210-20604250,20605770-20606519,
20606603-20606834,20607412-20607491,20607981-20608106
Length = 415
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 403 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGLLPI 519
G+ NR RGHV E S + ++ N+ FG LP+
Sbjct: 9 GIKNRGRGHVVEGSCQMKAQDMVSRSSCSKNKVFGSLPV 47
>06_01_0707 + 5136210-5136584
Length = 124
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 603 EVRTGLQGGPANGRIRTAGRPVRRCWNANRQ*TERLID 490
E R G+ GG +GR +RCW++ RQ + +ID
Sbjct: 2 EPRVGVNGGAVDGR--------QRCWSSRRQSGDHIID 31
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 199 HNSFLSGPLESSHNRVLNFIEVLNSF 122
HN L+ +E+SH VL FI +L SF
Sbjct: 183 HNGNLTNRMETSHEEVLPFIFLLLSF 208
>01_06_0456 + 29521282-29522064
Length = 260
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 621 RCRACSEVRTGLQGGPANGRIRTAGRPVRRCWNANRQ*TER 499
R C +G +GG R R AG RRC A+R T R
Sbjct: 11 RAWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLR 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,890,229
Number of Sequences: 37544
Number of extensions: 563393
Number of successful extensions: 1731
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1729
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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