Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0632
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 161 5e-40
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 161 5e-40
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 100 1e-21
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 100 1e-21
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical ... 33 0.21
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical pr... 31 0.63
AF016671-1|AAF02173.1| 621|Caenorhabditis elegans Hypothetical ... 29 2.5
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF040651-4|AAB95014.1| 234|Caenorhabditis elegans Hypothetical ... 29 4.4
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 5.8
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 161 bits (391), Expect = 5e-40
Identities = 73/84 (86%), Positives = 77/84 (91%)
Frame = +1
Query: 256 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 435
DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVF
Sbjct: 706 DAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVF 765
Query: 436 EESQVAGTPMFIVKAYLPVNESFG 507
EESQV GTPMF+VKAYLPVNESFG
Sbjct: 766 EESQVTGTPMFVVKAYLPVNESFG 789
Score = 155 bits (376), Expect = 3e-38
Identities = 65/84 (77%), Positives = 78/84 (92%)
Frame = +2
Query: 2 DFKTRARYLTEKYEYDVTEARKIWCFGPEGTAPNILVDCSKGVQYLNEIKDSVVAGFQWA 181
+FK RA+ L EKYEYDVTEARKIWCFGP+GT PN+L+D +KGVQYLNEIKDSVVAGFQWA
Sbjct: 621 EFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWA 680
Query: 182 AKEGVMAEENLRGVRFNIYDVTLH 253
+EGV+++EN+RGVRFN++DVTLH
Sbjct: 681 TREGVLSDENMRGVRFNVHDVTLH 704
Score = 112 bits (270), Expect = 2e-25
Identities = 49/63 (77%), Positives = 54/63 (85%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYL 686
FTADLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +V +TRKRKGLKEG+P L YL
Sbjct: 790 FTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYL 849
Query: 687 DKL 695
DK+
Sbjct: 850 DKM 852
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 161 bits (391), Expect = 5e-40
Identities = 73/84 (86%), Positives = 77/84 (91%)
Frame = +1
Query: 256 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 435
DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVF
Sbjct: 706 DAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVF 765
Query: 436 EESQVAGTPMFIVKAYLPVNESFG 507
EESQV GTPMF+VKAYLPVNESFG
Sbjct: 766 EESQVTGTPMFVVKAYLPVNESFG 789
Score = 151 bits (367), Expect = 4e-37
Identities = 64/84 (76%), Positives = 77/84 (91%)
Frame = +2
Query: 2 DFKTRARYLTEKYEYDVTEARKIWCFGPEGTAPNILVDCSKGVQYLNEIKDSVVAGFQWA 181
+FK RA+Y EKYEY VTEARKIWCFGP+GT PN+L+D +KGVQYLNEIKDSVVAGFQWA
Sbjct: 621 EFKARAKYPGEKYEYAVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWA 680
Query: 182 AKEGVMAEENLRGVRFNIYDVTLH 253
+EGV+++EN+RGVRFN++DVTLH
Sbjct: 681 TREGVLSDENMRGVRFNVHDVTLH 704
Score = 112 bits (270), Expect = 2e-25
Identities = 49/63 (77%), Positives = 54/63 (85%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYL 686
FTADLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +V +TRKRKGLKEG+P L YL
Sbjct: 790 FTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYL 849
Query: 687 DKL 695
DK+
Sbjct: 850 DKM 852
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 100 bits (239), Expect = 1e-21
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +1
Query: 256 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 435
+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV
Sbjct: 803 EPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVT 862
Query: 436 EESQVAGTPMFIVKAYLPVNESFG 507
++ + G+PM+ + AY+PV +SFG
Sbjct: 863 TDAPMPGSPMYTISAYIPVMDSFG 886
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Frame = +2
Query: 23 YLTEKYEYDVTEARKIWCFGPEGTAPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKE 190
+ KY +D+ AR IW FGP+ T PNIL+D + + L+ +++S+V GFQWA +E
Sbjct: 721 FFQTKYNWDLLAARSIWAFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATRE 780
Query: 191 GVMAEENLRGVRFNIYDVTLHMMP 262
G + EE +R V+F + D + P
Sbjct: 781 GPLCEEPIRQVKFKLLDAAIATEP 804
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETRKRKG 650
F DLR +T GQAF F HWQ++PGDP + Q P+ + +TR+RKG
Sbjct: 887 FETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKG 946
Query: 651 LKE 659
L E
Sbjct: 947 LSE 949
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 100 bits (239), Expect = 1e-21
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +1
Query: 256 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 435
+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV
Sbjct: 678 EPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVT 737
Query: 436 EESQVAGTPMFIVKAYLPVNESFG 507
++ + G+PM+ + AY+PV +SFG
Sbjct: 738 TDAPMPGSPMYTISAYIPVMDSFG 761
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +2
Query: 23 YLTEKYEYDVTEARKIWCFGPEGTAPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKE 190
+ KY +D+ AR IW FG + T PNIL+D + + L+ +++S+V GFQWA +E
Sbjct: 596 FFQTKYNWDLLAARSIWAFGLDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATRE 655
Query: 191 GVMAEENLRGVRFNIYDVTLHMMP 262
G + EE +R V+F + D + P
Sbjct: 656 GPLCEEPIRQVKFKLLDAAIATEP 679
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETRKRKG 650
F DLR +T GQAF F HWQ++PGDP + Q P+ + +TR+RKG
Sbjct: 762 FETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKG 821
Query: 651 LKE 659
L E
Sbjct: 822 LSE 824
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +1
Query: 274 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 453
GGQ++ + A RL+ +Y C + A+G ++ VL++R+ V E
Sbjct: 732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINE 791
Query: 454 GTPMFIVKAYLPVNESF 504
T +F V + +PV ESF
Sbjct: 792 ATNLFEVVSLMPVVESF 808
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDP 593
F LR T G A Q F HWQV+ DP
Sbjct: 810 FCDQLRKFTSGMASAQLQFSHWQVIDEDP 838
>AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2A.1 protein.
Length = 382
Score = 33.1 bits (72), Expect = 0.21
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 318 TCVQASSSCWNDLATTSMDGIIWS 247
TC + +S W D++TT +DG +WS
Sbjct: 243 TCTKDNSFEWTDMSTTGIDGFLWS 266
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 507 FTADLRSNTGGQAFPQCVFDHWQVLPGDP 593
F LR T G A Q F HWQV+ DP
Sbjct: 621 FCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical
protein D1054.7 protein.
Length = 113
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 339 TGLSS*QTCVQASSSCWNDLATTSMDGIIW 250
TG+ TC + +S W D +TT DG IW
Sbjct: 41 TGMMLTATCTKLNSFEWTDGSTTGTDGFIW 70
>AF016671-1|AAF02173.1| 621|Caenorhabditis elegans Hypothetical
protein W09G10.6 protein.
Length = 621
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 321 QTCVQASSSCWNDLATTSMDGIIW 250
Q C +S W D +TT +DGI W
Sbjct: 536 QNCTSDNSFEWTDKSTTGLDGIDW 559
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 144 KLRTLLWLDSSGPLRKELWLKRICVVLDST 233
K++TL+W PL KEL L+R+ V D +
Sbjct: 256 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 285
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 144 KLRTLLWLDSSGPLRKELWLKRICVVLDST 233
K++TL+W PL KEL L+R+ V D +
Sbjct: 270 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 299
>Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical
protein T27D12.3 protein.
Length = 146
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 318 TCVQASSSCWNDLATTSMDGIIW 250
TC +S W D +TT DG IW
Sbjct: 110 TCTALNSFEWTDGSTTGTDGFIW 132
>AF040651-4|AAB95014.1| 234|Caenorhabditis elegans Hypothetical
protein W04H10.4 protein.
Length = 234
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 318 TCVQASSSCWNDLATTSMDGIIW 250
TC +S W D +TT DG IW
Sbjct: 168 TCTALNSFEWTDGSTTGTDGFIW 190
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 274 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 420
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,648,443
Number of Sequences: 27780
Number of extensions: 445610
Number of successful extensions: 1255
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -