Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0631
         (761 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0676 + 10337085-10337565,10337675-10337920,10338074-10338132     29   3.1  
12_02_1110 + 26154024-26154314,26154400-26154944,26155023-261551...    29   5.3  
08_02_0182 - 13930436-13931245,13931348-13931627,13931788-139323...    28   7.1  
03_01_0593 + 4379263-4379377,4380359-4380491,4380585-4380656,438...    28   7.1  
01_03_0196 - 13696056-13697448,13697676-13697713                       28   7.1  
08_01_0820 - 7957563-7957646,7958036-7958134,7958233-7959729           28   9.3  
04_01_0551 - 7119130-7119464,7119601-7119985,7121010-7121690           28   9.3  

>03_02_0676 + 10337085-10337565,10337675-10337920,10338074-10338132
          Length = 261

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +2

Query: 584 QIRSNLPADELAPTAPEEASTL 649
           QI SNLPAD+ AP A EEAS L
Sbjct: 235 QIMSNLPADDQAPDA-EEASLL 255


>12_02_1110 +
           26154024-26154314,26154400-26154944,26155023-26155109,
           26155237-26155293,26155369-26155607,26155715-26155833,
           26155945-26156031,26156117-26156194
          Length = 500

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +1

Query: 22  YLQAWQISTTLGKLVTAIKISNMGIFFLTIEIFSDNILYAWLTMAASPWV 171
           +LQA  I   +  +  A+ I ++ I +LT+ +    +L A LT++ S WV
Sbjct: 185 FLQAQNIVNPVAYITMAVLIFHILISWLTVFVLGFGLLGAALTLSFSWWV 234


>08_02_0182 -
           13930436-13931245,13931348-13931627,13931788-13932324,
           13932482-13932579,13932678-13933118
          Length = 721

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = -3

Query: 420 WPPVARSEAVSAPRSDWAVNIARTTCNL*HLAQLMHV--RRTRSQANNAHAFLMILHRSD 247
           W  + R   V +    W  N+ + T     L + MH   +R + Q      F+M++  S 
Sbjct: 153 WAGLFRKYLVDSAYMWWPSNLVQVT-----LFRAMHEEEKRNKGQLTRLQFFIMVMTCSF 207

Query: 246 RPHIVNKYSFPVIA 205
             +IV  Y FP I+
Sbjct: 208 AYYIVPSYLFPAIS 221


>03_01_0593 +
           4379263-4379377,4380359-4380491,4380585-4380656,
           4380739-4380813,4380896-4380967,4381055-4381126,
           4381251-4381322,4381403-4381468,4381547-4381612,
           4381689-4381978,4382072-4382355,4382690-4382961,
           4383411-4383546,4383840-4383970,4384078-4384234,
           4384334-4384477
          Length = 718

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 4   RAEGGEYL-QAWQISTTLGKLVTAIKISNMGI 96
           +A GG+   Q+WQ  T  G  VTAIK+ ++G+
Sbjct: 59  QASGGDPCGQSWQGITCSGSSVTAIKLPSLGL 90


>01_03_0196 - 13696056-13697448,13697676-13697713
          Length = 476

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 154 PSSTKHTKYYLKIFQWLRKICPCLKF*LQLLISQEWWRSAMLEGI 20
           P  T H +  LK+F++ RKIC      L L+    W R+ +   I
Sbjct: 355 PERTFHLEELLKLFRFCRKICLSATLVLALMSIGGWVRNLIAGSI 399


>08_01_0820 - 7957563-7957646,7958036-7958134,7958233-7959729
          Length = 559

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 423 DWPPVARSEAVSAPRS 376
           DWP +AR E + APRS
Sbjct: 188 DWPSLARGEGIVAPRS 203


>04_01_0551 - 7119130-7119464,7119601-7119985,7121010-7121690
          Length = 466

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = +3

Query: 237 CVVGQICEGSLKKRGHCLLVSGSDARALTAPDVINCKLSVRCSPPNQIAEQTQP----RS 404
           C V  I  G +  R   L V+ +DAR L A  V+  +L     PP   A +  P    +S
Sbjct: 145 CAVDLIY-GEVCARRLALPVTPTDARGLYARGVLGVELGPDDVPPFVAAPELTPAFCEQS 203

Query: 405 VLRVANRSTRDSVHSHTAHDLEP 473
           + + A     D V  ++  DLEP
Sbjct: 204 IEQFAGLEDDDDVLVNSFSDLEP 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,150,607
Number of Sequences: 37544
Number of extensions: 471282
Number of successful extensions: 1294
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)