Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0631
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-16|CAB54451.2|  922|Caenorhabditis elegans Hypothetical...    30   2.1  
U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z77652-1|CAB01121.1|  254|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    28   6.3  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    28   6.3  
DQ812088-1|ABG89384.1|  530|Caenorhabditis elegans mammalian str...    28   6.3  
AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical...    28   6.3  
AC024823-2|AAF59596.3|  530|Caenorhabditis elegans Hypothetical ...    28   6.3  
AC024823-1|AAL32257.1|  510|Caenorhabditis elegans Hypothetical ...    28   6.3  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    28   8.3  

>AL110490-16|CAB54451.2|  922|Caenorhabditis elegans Hypothetical
           protein Y48B6A.11 protein.
          Length = 922

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 606 PMNLHLRLQKKHLLYKMTGPTPPYAYYPVMRE 701
           P+N+  +  K H L++ TG +    +YP MRE
Sbjct: 65  PVNISAKHLKDHPLHEPTGTSEVLTFYPTMRE 96


>U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical
           protein F36H5.5 protein.
          Length = 576

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +1

Query: 58  KLVTAIKISNMGIFFLTIEIFSDNILYAWLTMAASPWVANGFSYT 192
           K+ TA K S M +F +  EIF   + +  L   A  +VA+GF YT
Sbjct: 507 KITTAQKAS-MVLFLVISEIFYIGLSFLDLDPLADEYVASGFFYT 550


>U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical
           protein EEED8.10a protein.
          Length = 738

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 149 VNQAYKILSENISMVKKNMPMFEIL 75
           +N+ YKI  EN+SM+ + M    IL
Sbjct: 450 INECYKITDENLSMIARRMEDLSIL 474


>Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 554 RSTADPQPRPQIRSNLPADELAPTAPEEAST 646
           RST  P P   I +N PA  LA  AP  A++
Sbjct: 357 RSTTTPVPSTPISANSPAPSLAQAAPIAAAS 387


>Z77652-1|CAB01121.1|  254|Caenorhabditis elegans Hypothetical
           protein C06B3.1 protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +1

Query: 64  VTAIKISNM---GIFFLTIEIFSDNILYAWLTMAASPWVANGFSYTVTI 201
           V+ I I N+   G+F +++  F+ + +Y +L +    WV N   Y +TI
Sbjct: 86  VSFIYIMNLMLCGMFGMSMAFFALHFIYRYLVITGHEWVKNVSFYKLTI 134


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
            protein 1 protein.
          Length = 4568

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 361  HRTDNLQFMTSGAVNARASDPLTSKQCPRFFNDPSQI*PTTHC 233
            H+ D  + + S  +  RA++     QC RF+ DP Q+ P   C
Sbjct: 1776 HKRDTCRKLVS--MKIRAANDFGWLQCMRFYFDPKQVDPVRCC 1816


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
            protein.
          Length = 4568

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 361  HRTDNLQFMTSGAVNARASDPLTSKQCPRFFNDPSQI*PTTHC 233
            H+ D  + + S  +  RA++     QC RF+ DP Q+ P   C
Sbjct: 1776 HKRDTCRKLVS--MKIRAANDFGWLQCMRFYFDPKQVDPVRCC 1816


>DQ812088-1|ABG89384.1|  530|Caenorhabditis elegans mammalian
           stromal interaction molecule-1 protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 297 SGSDARALTAPDVINCKLSVRCSPPNQIAEQTQPRSVLRVANRSTRDSVHS 449
           SGS + A + P+ +N     + SPP   ++QT   + LR       DS+HS
Sbjct: 415 SGSISNAHSNPNAVNSNFVKKVSPPIPPSQQT---ANLRFVPTEQSDSIHS 462


>AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 554 RSTADPQPRPQIRSNLPADELAPTAPEEAST 646
           RST  P P   I +N PA  LA  AP  A++
Sbjct: 357 RSTTTPVPSTPISANSPAPSLAQAAPIAAAS 387


>AC024823-2|AAF59596.3|  530|Caenorhabditis elegans Hypothetical
           protein Y55B1BM.1a protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 297 SGSDARALTAPDVINCKLSVRCSPPNQIAEQTQPRSVLRVANRSTRDSVHS 449
           SGS + A + P+ +N     + SPP   ++QT   + LR       DS+HS
Sbjct: 415 SGSISNAHSNPNAVNSNFVKKVSPPIPPSQQT---ANLRFVPTEQSDSIHS 462


>AC024823-1|AAL32257.1|  510|Caenorhabditis elegans Hypothetical
           protein Y55B1BM.1b protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 297 SGSDARALTAPDVINCKLSVRCSPPNQIAEQTQPRSVLRVANRSTRDSVHS 449
           SGS + A + P+ +N     + SPP   ++QT   + LR       DS+HS
Sbjct: 395 SGSISNAHSNPNAVNSNFVKKVSPPIPPSQQT---ANLRFVPTEQSDSIHS 442


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 515  AFATLGRDANALVRSTADPQPRPQIRSNLPADELAPTAPEEASTLQNDGPDTT 673
            A A+L  ++ A  R+ A P P+P  RS      + PTA    ++ QN  P T+
Sbjct: 1339 ALASLAGNSGAQ-RAVAAPLPKPVTRSPQVQKPIKPTASRSFTSFQN-SPSTS 1389


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,182,452
Number of Sequences: 27780
Number of extensions: 389369
Number of successful extensions: 968
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)