Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0629
         (615 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q988I3 Cluster: Multidrug efflux membrane fusion protei...    34   2.3  
UniRef50_Q5KQY6 Cluster: Galactoside O-acetyltransferase; n=3; K...    33   5.4  
UniRef50_A6LGP5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_A1R5Q7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_A5K5G4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  

>UniRef50_Q988I3 Cluster: Multidrug efflux membrane fusion protein;
           n=2; Rhizobiales|Rep: Multidrug efflux membrane fusion
           protein - Rhizobium loti (Mesorhizobium loti)
          Length = 402

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +1

Query: 172 CLRTRNHRLPSSRRWCCH*ANRALPCYRGPVAPGQPAPLVQIIVNVNQPGADAAIIPQPV 351
           C R+  HR  + RRW    +  +  C       G   P V  +    QPGA  A  P P 
Sbjct: 5   CERSERHRSVARRRWI---SRASWACLMAACLGGAAPPFVSSVSFAQQPGARQA--PPPA 59

Query: 352 IVDESDEVK 378
           +V E  EV+
Sbjct: 60  VVVEKIEVQ 68


>UniRef50_Q5KQY6 Cluster: Galactoside O-acetyltransferase; n=3;
           Klebsiella pneumoniae|Rep: Galactoside
           O-acetyltransferase - Klebsiella pneumoniae
          Length = 170

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = -1

Query: 411 FSLFGDNNGVGFDFIRLVNNDGLGNDSCISAWLVHVHND 295
           F   GDN  +G DFI  VN   +GNDS IS+ +  + ND
Sbjct: 58  FVKMGDNVSIGADFISQVNLT-IGNDSLISSRVSFIGND 95


>UniRef50_A6LGP5 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           uncharacterized protein - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 460

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = -1

Query: 408 SLFGDNNGVGFDFIRLVNNDGLGNDSCISAWLVHVHNDLNERSGLAWCDWST-ITGE-GT 235
           S++  NN  GFDF      DG G+   I+  L  + +   E +GL   DW   + G  G+
Sbjct: 97  SIYDANNSYGFDFATSNLKDG-GSTYKIAIVLYVLKDSPAEEAGLKRGDWILGVNGSLGS 155

Query: 234 IGSVTAPPSGRGKSMISGPKTGSCMG 157
           I       SG   S+  G +TG+  G
Sbjct: 156 IQDYDVLRSGGSVSLQLGKETGNTKG 181


>UniRef50_A1R5Q7 Cluster: Putative uncharacterized protein; n=1;
           Arthrobacter aurescens TC1|Rep: Putative uncharacterized
           protein - Arthrobacter aurescens (strain TC1)
          Length = 100

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
 Frame = -3

Query: 259 VHDNRGGHDWLSDSTTVGKREVDDF---------GSEDRLLYGVESDEDFVQMLEKESSG 107
           V   RGG +WL D   V    +DD          G+E+ +  G+E   DFV     + +G
Sbjct: 8   VRVGRGGANWLRDGREVPVGLIDDLKGKAQGLIQGNEEAIKNGIEKAGDFVD----QKTG 63

Query: 106 GWVCAGAVDSVQN 68
           G   AG VD VQN
Sbjct: 64  G-KYAGHVDKVQN 75


>UniRef50_A5K5G4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1044

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -3

Query: 208 GKREVDDFGSEDRLLYGVESDEDFVQMLEKESSGG 104
           G+ E+ D  S D +L G+ESDED  + +++ SSGG
Sbjct: 112 GEEEMSDM-STDEMLSGMESDEDVSEEVKQFSSGG 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,062,601
Number of Sequences: 1657284
Number of extensions: 9666691
Number of successful extensions: 31527
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31503
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)