Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0629
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    31   0.039
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   1.9  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    24   4.5  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   7.8  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 30.7 bits (66), Expect = 0.039
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 217 TTVGKREVDDFGSEDRLLYGVESDEDFVQMLEKESS 110
           T+ G +E++DF SED  +    S +D + +L+   S
Sbjct: 244 TSYGSKEINDFRSEDWFIQAASSPKDVIILLDSSGS 279


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
 Frame = +1

Query: 193 RLPSSRRWCCH*AN-----RALPCYRGPVAPGQPAPLVQI-IVNVNQPGADAA 333
           R   S+ W  H  N     R  PCYRGP       P+ Q+ ++ VN  G   A
Sbjct: 22  RTGRSQGWYMHGRNTLRQMRWPPCYRGPDMRSVGHPMTQLKVLQVNLGGGRIA 74


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 187 NHRLPSSRRWCCH*ANRALPCYRGPVAPGQPAPLV 291
           N R+   R W C  AN +L  ++     G   PL+
Sbjct: 124 NRRISPLRAWLCEHANTSLAKFQNLKEIGLDKPLI 158


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 58  AASHSGRYPQPQHRPSH 108
           ++SHS    QP H P H
Sbjct: 344 SSSHSHSQAQPHHNPHH 360


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,591
Number of Sequences: 2352
Number of extensions: 9463
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)