Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0625
         (677 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8XP96 Cluster: Glycogen biosynthesis protein; n=4; Clo...    33   8.4  
UniRef50_Q89DS7 Cluster: Bll7362 protein; n=10; Alphaproteobacte...    33   8.4  
UniRef50_A4FEY2 Cluster: Phosphoesterase, PA-phosphatase related...    33   8.4  

>UniRef50_Q8XP96 Cluster: Glycogen biosynthesis protein; n=4;
           Clostridium|Rep: Glycogen biosynthesis protein -
           Clostridium perfringens
          Length = 368

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 533 LEYY*RSRPFY*TISPWYRVCNLNLSERLIFNSK*D 640
           LE+  +SR  Y  +SP Y +CN++L E L ++ K D
Sbjct: 105 LEFLTKSRREYVIMSPSYMICNIDLKEALEYHKKND 140


>UniRef50_Q89DS7 Cluster: Bll7362 protein; n=10;
           Alphaproteobacteria|Rep: Bll7362 protein -
           Bradyrhizobium japonicum
          Length = 270

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 280 IWLLYTNYLIRSVYGVHSLFIGVRRDLSLGFE*NPGLLYVAIAQAV 143
           IW+     LI  + G+H+ F  ++  +++    N GLL++AI  AV
Sbjct: 136 IWMYQVRLLIALLLGLHASFSSLQEFMTVVLTTNEGLLFLAIGNAV 181


>UniRef50_A4FEY2 Cluster: Phosphoesterase, PA-phosphatase related;
           n=1; Saccharopolyspora erythraea NRRL 2338|Rep:
           Phosphoesterase, PA-phosphatase related -
           Saccharopolyspora erythraea (strain NRRL 23338)
          Length = 227

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 130 CTMATLPGQWRRTATPDFIQILTTSRALRQ*TASGRHK 243
           C MAT  G WRR A    + + TTS A+       RH+
Sbjct: 53  CAMATHAGTWRRAAVRAMLSVATTSLAIHVCVKPVRHR 90


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,336,914
Number of Sequences: 1657284
Number of extensions: 10367364
Number of successful extensions: 19191
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19190
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)