Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0625
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.0  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   9.3  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 527 TKLEYY*RSRPFY*TISPWYRVCNLNLSERLIF 625
           T L Y   +R +Y     W  VC LNLS   IF
Sbjct: 44  TNLTYNNTNRKYY-----WLNVCCLNLSIVTIF 71


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 66  YFNIDVSQIDLRRPLQVLF 122
           +F ID    + R+P+++LF
Sbjct: 301 FFEIDRINAESRKPIRILF 319


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/29 (27%), Positives = 10/29 (34%)
 Frame = -1

Query: 239 WRPLAVYWRKARLVVRI*IKSGVAVRRHC 153
           WR     W    L   + I S    + HC
Sbjct: 12  WRAFTASWSPDTLAKNLGINSSFVHKEHC 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,537
Number of Sequences: 336
Number of extensions: 2857
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)