Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0624
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    32   0.003
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    28   0.046
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    28   0.061
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    27   0.081
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   5.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.0  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 167  LPHEGNCNLFYYCVWGRKVLRHCPSTLHFTKSSR 268
            +P   NCN +Y CV G    ++C   LH+ K  +
Sbjct: 1109 VPDPHNCNAYYRCVLGELRKQYCAGGLHWNKERK 1142



 Score = 30.7 bits (66), Expect = 0.009
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 170  PHEGNCNLFYYCVWGRKVLRHCPSTLHF 253
            PHE +C+ FY CV G  V ++C   LH+
Sbjct: 1214 PHE-SCSSFYVCVNGHLVPQNCAPGLHY 1240



 Score = 28.7 bits (61), Expect = 0.035
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +2

Query: 173  HEGNCNLFYYCVWGRKVLRHCPSTLHF 253
            + G+C  + +C+WG+  + +C   LH+
Sbjct: 1287 YPGDCTRYLHCLWGKYEVFNCAPGLHW 1313



 Score = 25.4 bits (53), Expect = 0.33
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 182  NCNLFYYCVWGRKVLRHCPSTLHFTK 259
            NC  +Y C  G+  L+ CP+ L + K
Sbjct: 2248 NCAQYYLCNQGQLQLQVCPNGLFWNK 2273



 Score = 23.8 bits (49), Expect = 1.00
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 268  VCDWPWDAGCASSFDKNAV 324
            +CDWP  A C  + + N V
Sbjct: 1319 ICDWPEKATCDGTSNVNVV 1337



 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 253  HKVIQVCDWPWDAGC 297
            +K  ++CDWP  A C
Sbjct: 1138 NKERKICDWPKSAKC 1152


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 28.3 bits (60), Expect = 0.046
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 149 PHIHWLLPHEGN--CNLFYYCVWGRKVLRHCPSTL 247
           P  H    HE    C+ FYYCV G+  +  CP+ L
Sbjct: 108 PRKHGYFAHEEPHICDKFYYCVDGKYNMITCPNGL 142



 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 211 GKKSLETLP*HITLHKVIQVCDWPWDA---GCAS 303
           GK ++ T P  +  +    +C WP +A   GC+S
Sbjct: 131 GKYNMITCPNGLVYNDKAGICSWPDEAKKKGCSS 164


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 27.9 bits (59), Expect = 0.061
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 170  PHEGNCNLFYYCVWGRKVLRHCPSTLHF 253
            P + +C ++Y C   RK    CPS L F
Sbjct: 926  PDKADCRMYYMCEGERKHHMPCPSNLVF 953


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 27.5 bits (58), Expect = 0.081
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 167 LPHEGNCNLFYYCVWGRKVLRHCPSTLHFTKSSRFATGLGTQAVHHLSTRTPWPGE 334
           +P   +CN ++ C  G   L+ CP+ L F + S       T+     ST  P P E
Sbjct: 164 VPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLRCVVPPTEDCDVPSTIPPPPPE 219


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 7   HNTSSYNYPGTGY*ASNYDG 66
           HNTSS+NY    Y A  Y G
Sbjct: 293 HNTSSHNYYAQNY-APTYYG 311


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = +2

Query: 182 NCNLFYYCV 208
           +C++FYYC+
Sbjct: 433 DCSIFYYCL 441


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 449 TLFGAFNKRESTFVEYQDCR 390
           TLF A+ K ES  V Y D +
Sbjct: 14  TLFAAYCKAESKVVCYYDSK 33


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 266 RFATGLGTQAVHHLSTRTPWPGE*LVKSKYPSI 364
           RF++G+G +A  HL  R     E L   K PS+
Sbjct: 73  RFSSGVGRKAWKHLDFRNSATAELL---KNPSL 102


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 266 RFATGLGTQAVHHLSTRTPWPGE*LVKSKYPSI 364
           RF++G+G +A  HL  R     E L   K PS+
Sbjct: 73  RFSSGVGRKAWKHLDFRNSATAELL---KNPSL 102


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/36 (27%), Positives = 13/36 (36%)
 Frame = +2

Query: 173 HEGNCNLFYYCVWGRKVLRHCPSTLHFTKSSRFATG 280
           H  +C  +Y C+ G      CP    F       TG
Sbjct: 174 HPDDCRKYYICLEGTAREYGCPIGTVFKIGDADGTG 209


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/36 (27%), Positives = 13/36 (36%)
 Frame = +2

Query: 173 HEGNCNLFYYCVWGRKVLRHCPSTLHFTKSSRFATG 280
           H  +C  +Y C+ G      CP    F       TG
Sbjct: 174 HPDDCRKYYICLEGTAREYGCPIGTVFKIGDADGTG 209


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 546 LYVLFLFTNISVYFLKLYNKII 481
           L V+ +  ++ V+F  L+NK++
Sbjct: 109 LGVMVVTVDLHVFFFTLFNKLL 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,955
Number of Sequences: 336
Number of extensions: 2778
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)