Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0624
         (547 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    40   0.001
U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    36   0.025
Z70311-3|CAA94372.1|  546|Caenorhabditis elegans Hypothetical pr...    30   0.95 
U23169-3|AAV58882.1|  284|Caenorhabditis elegans Regulator of g ...    29   2.2  
U23169-2|AAM98050.1|  290|Caenorhabditis elegans Regulator of g ...    29   2.2  
U23169-1|AAL02450.1|  363|Caenorhabditis elegans Regulator of g ...    29   2.2  
AF101310-4|AAC69214.2|  662|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z81585-1|CAB04681.2|  343|Caenorhabditis elegans Hypothetical pr...    27   6.7  

>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
            H02I12.1 protein.
          Length = 1319

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +2

Query: 182  NCNLFYYCVWGRKVLRHCPS 241
            NC +FY CVWGRKV+  CPS
Sbjct: 1257 NCEVFYRCVWGRKVVMTCPS 1276


>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +2

Query: 170 PHEGNCNLFYYCVWGRKVLRHCPSTLHFTKSSRFATGLGTQAVHHLSTRTP 322
           P+  NC LF  C+  +     CPS L ++ S ++ T          +TR P
Sbjct: 490 PNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTRAP 540


>Z70311-3|CAA94372.1|  546|Caenorhabditis elegans Hypothetical
           protein T25B9.4 protein.
          Length = 546

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +3

Query: 228 DIALAHYTSQS--HPGLRLALGRRLCIIFRQERRGQEN 335
           D    HY      HP LR+ LGR +C+ F + +  Q N
Sbjct: 96  DALYNHYRKNELVHPNLRIKLGRPICLFFWEFKHSQIN 133


>U23169-3|AAV58882.1|  284|Caenorhabditis elegans Regulator of g
           protein signalingprotein 3, isoform c protein.
          Length = 284

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 164 ASEYEG*LGNHFQGNQFRVFLVQVPAWE 81
           A  +EG LGNH   + FR+FL  + A E
Sbjct: 159 AQSFEGLLGNHVGRHHFRIFLRSIHAEE 186


>U23169-2|AAM98050.1|  290|Caenorhabditis elegans Regulator of g
           protein signalingprotein 3, isoform b protein.
          Length = 290

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 164 ASEYEG*LGNHFQGNQFRVFLVQVPAWE 81
           A  +EG LGNH   + FR+FL  + A E
Sbjct: 165 AQSFEGLLGNHVGRHHFRIFLRSIHAEE 192


>U23169-1|AAL02450.1|  363|Caenorhabditis elegans Regulator of g
           protein signalingprotein 3, isoform a protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 164 ASEYEG*LGNHFQGNQFRVFLVQVPAWE 81
           A  +EG LGNH   + FR+FL  + A E
Sbjct: 238 AQSFEGLLGNHVGRHHFRIFLRSIHAEE 265


>AF101310-4|AAC69214.2|  662|Caenorhabditis elegans Hypothetical
           protein C39F7.5 protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 143 VNPHIHWLLPHEGNCNLFYYCVWGRKVLRH 232
           +NP +HWL P + +    YY  +   +L+H
Sbjct: 520 INPDVHWLKPEDESTGPRYYRPYHTALLKH 549


>Z81585-1|CAB04681.2|  343|Caenorhabditis elegans Hypothetical
           protein T05E12.1 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 420 FPFIKCTKQCFGLFISHVPIR*FY-YIVL 503
           FP I  T  CFGL +S + ++ FY YI +
Sbjct: 86  FPLIATTSGCFGLCLSVLALQFFYRYIAI 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,771,150
Number of Sequences: 27780
Number of extensions: 242258
Number of successful extensions: 503
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)