Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0621
(789 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 23 2.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 3.7
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 22 4.9
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 22 4.9
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 22 6.4
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 22 6.4
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 8.5
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 133 ITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRH 255
I P ++P Y GG + T PG T+++ + +RH
Sbjct: 658 IRPPKKIPTPY----GGRLVWTLPGKTKMIAHLKDKMKIRH 694
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 133 ITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRH 255
I P ++P Y GG + T PG T+++ + +RH
Sbjct: 658 IRPPKKIPTPY----GGRLVWTLPGKTKMIAHLKDKMKIRH 694
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 133 ITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRH 255
I P ++P Y GG + T PG T+++ + +RH
Sbjct: 658 IRPPKKIPTPY----GGRLVWTLPGKTKMIAHLKDKMKIRH 694
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 133 ITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRH 255
I P ++P Y GG + T PG T+++ + +RH
Sbjct: 658 IRPPKKIPTPY----GGRLVWTLPGKTKMIAHLKDKMKIRH 694
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 638 YCFCGLLSNVLLFVLANTG 694
YC CG + + +LF L+ G
Sbjct: 47 YCICGYIFSAILFSLSILG 65
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.6 bits (46), Expect = 3.7
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 243 IPSASPISQTPPQCALPAALLKNPSSVPNAHRSSTQKPRSNSISFDES 386
+P+A+ + PPQ A AA L N ++V A + S + ++ F+ +
Sbjct: 129 LPAAAAAALLPPQTAAMAAYL-NAAAVAAAAQQSHRLMMTSPSGFNRA 175
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 22.2 bits (45), Expect = 4.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 277 RNVHFPQPY*RIRLRYPTRTGPAHKNL 357
RN+ P+ R+R Y TRTG K L
Sbjct: 281 RNIRGPRK--RLRFAYVTRTGANIKKL 305
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 583 LFRSLVAL*KLNSLTVILLLFLWIIIECFIVCVSKYGFWF 702
L ++LV + K + L LW+++ +V V + F+F
Sbjct: 84 LHKTLVRVAKSLNQVFAPQLLLWVLLGVMVVTVDLHVFFF 123
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +3
Query: 639 IVFVDYYRMFYCLC*QIRVLVSANYFVFVIIR 734
I+ +++Y+ F Q+ VL N+ FV+++
Sbjct: 139 IMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVK 170
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +3
Query: 639 IVFVDYYRMFYCLC*QIRVLVSANYFVFVIIR 734
I+ +++Y+ F Q+ VL N+ FV+++
Sbjct: 139 IMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVK 170
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 179 AEPSTPPLLEVQE 217
A PS PP LEV E
Sbjct: 227 ATPSPPPQLEVNE 239
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,857
Number of Sequences: 336
Number of extensions: 4298
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -