Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0620
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.33 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.4  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 440 VQNIKLHSIVSERVLE*MTSCIELVKLLSKLTVKNF 333
           V N+    + +E VL   T  + L K L+K+TVKNF
Sbjct: 175 VFNVAQCYLTTELVLMLQTRFVILNKQLTKITVKNF 210


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/32 (28%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = -3

Query: 143 WYCFFRWLV-YRIA--TRQLVVQLAPWEILLK 57
           W C +RW+V Y ++  ++ +++Q   + ++LK
Sbjct: 161 WRCLYRWIVLYTLSKMSQVMLIQFCAFVVVLK 192


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 93  ELTCSNPVHQP 125
           E TC  PVH+P
Sbjct: 91  EPTCDEPVHRP 101


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 548 SNLPKNNFGLLLNHNNTLENIHLHMS 471
           + L ++NF   LN N     +H H S
Sbjct: 394 ARLLRHNFNRHLNSNRAPLGLHFHAS 419


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 548 SNLPKNNFGLLLNHNNTLENIHLHMS 471
           + L ++NF   LN N     +H H S
Sbjct: 401 ARLLRHNFNRHLNSNRAPLGLHFHAS 426


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 358 SNFTSSMQDVIYSKTLSETMLCNLIFCTFI 447
           SNF+  + D+I   TL+ T +  ++   F+
Sbjct: 71  SNFSVFLFDIITIVTLTSTSILLIVNAVFV 100


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 167 HFYMACILWYCFFRWLVYRI 108
           HF +  ++ YC+   L+Y I
Sbjct: 209 HFKIIQVVPYCYINCLIYLI 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,691
Number of Sequences: 336
Number of extensions: 3435
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)