Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0620
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...    58   1e-08
U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...    58   1e-08
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...    58   1e-08
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...    58   1e-08
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...    58   1e-08
BT010071-1|AAQ22540.1| 1250|Drosophila melanogaster LD11744p pro...    30   2.6  

>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -2

Query: 126 MAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWR 1
           MAG++DCYTSARGSTGTLGNF             YLTPDLW+
Sbjct: 199 MAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWK 240


>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -2

Query: 126 MAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWR 1
           MAG++DCYTSARGSTGTLGNF             YLTPDLW+
Sbjct: 199 MAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWK 240


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -2

Query: 126 MAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWR 1
           MAG++DCYTSARGSTGTLGNF             YLTPDLW+
Sbjct: 199 MAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWK 240


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -2

Query: 126 MAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWR 1
           MAG++DCYTSARGSTGTLGNF             YLTPDLW+
Sbjct: 199 MAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWK 240


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -2

Query: 126 MAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWR 1
           MAG++DCYTSARGSTGTLGNF             YLTPDLW+
Sbjct: 199 MAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWK 240


>BT010071-1|AAQ22540.1| 1250|Drosophila melanogaster LD11744p protein.
          Length = 1250

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 494  ENIHLHMSKPNGIALNIKVQNIKLHSIVSERVL 396
            E     +S P+G+A  +  QNI+LH IV E  L
Sbjct: 1054 ERAQFTISCPDGLAHGLSEQNIRLHQIVQEHKL 1086


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,587,284
Number of Sequences: 53049
Number of extensions: 564029
Number of successful extensions: 1262
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)