Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0617
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 167 2e-40
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 155 8e-37
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 155 1e-36
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 138 2e-31
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 136 5e-31
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 126 8e-28
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 112 1e-23
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 108 1e-22
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 103 5e-21
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 100 3e-20
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 97 3e-19
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 92 2e-17
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 86 8e-16
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 85 2e-15
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 83 5e-15
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 81 2e-14
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 80 5e-14
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 80 7e-14
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 77 4e-13
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 75 1e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 75 1e-12
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 73 8e-12
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 73 8e-12
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 72 1e-11
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 72 2e-11
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 72 2e-11
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 71 4e-11
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 70 7e-11
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 69 9e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 69 2e-10
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 68 2e-10
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 67 4e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 1e-09
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 65 2e-09
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 59 1e-07
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 59 1e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 58 2e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 5e-07
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 54 3e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 9e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 51 3e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 3e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 5e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 50 8e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 3e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 47 4e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 4e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 0.003
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 44 0.005
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.005
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.009
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.016
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.028
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.028
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 40 0.049
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 40 0.086
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 40 0.086
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 39 0.15
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.20
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.35
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.35
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.46
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.46
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.61
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 37 0.61
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 36 0.81
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.1
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.4
UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel... 35 1.9
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 2.5
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.5
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.5
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 3.3
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 34 3.3
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 34 4.3
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 33 7.5
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 7.5
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.5
UniRef50_A2F8H3 Cluster: Kelch motif family protein; n=1; Tricho... 33 7.5
UniRef50_Q55Y36 Cluster: Putative uncharacterized protein; n=2; ... 33 7.5
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 9.9
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 9.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 167 bits (407), Expect = 2e-40
Identities = 81/100 (81%), Positives = 86/100 (86%)
Frame = +3
Query: 216 KNRQTREHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 395
K + E L PIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 396 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR 515
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWG +
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Score = 126 bits (304), Expect = 6e-28
Identities = 57/66 (86%), Positives = 59/66 (89%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
GNKIGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T
Sbjct: 171 GNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCT 230
Query: 686 WHLGKF 703
LG F
Sbjct: 231 ATLGNF 236
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSFQSKNS 270
K + KEW+PVTKLGRLV++ KI LE IYLFS K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 155 bits (377), Expect = 8e-37
Identities = 69/99 (69%), Positives = 86/99 (86%)
Frame = +3
Query: 216 KNRQTREHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 395
K + E L PIKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 396 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGT 512
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWGT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGT 145
Score = 106 bits (255), Expect = 5e-22
Identities = 45/66 (68%), Positives = 55/66 (83%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G +G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST
Sbjct: 144 GTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGST 203
Query: 686 WHLGKF 703
LG F
Sbjct: 204 KTLGNF 209
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/36 (61%), Positives = 29/36 (80%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSFQSK 264
++++KEWVPVTKLGRLV+ GKI +E IYL+S K
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 155 bits (375), Expect = 1e-36
Identities = 76/100 (76%), Positives = 81/100 (81%)
Frame = +3
Query: 216 KNRQTREHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 395
K + E L PIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 396 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR 515
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWG +
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNK 113
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTGKCGSVTVRLIPAP 592
GNKIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 111 GNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 178 VPVTKLGRLVREGKIDKLESIYLFSFQSKNS 270
+PVTKLG L+ + KI LE IYLFS K S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 138 bits (333), Expect = 2e-31
Identities = 65/101 (64%), Positives = 82/101 (81%), Gaps = 2/101 (1%)
Frame = +3
Query: 234 EHLLVF-FPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 410
EH+ +F PIKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 411 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-*ESHT 530
LGVK KEVA +I+G++ILAKL+++PVRRGYWG++ E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 90.2 bits (214), Expect = 5e-17
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G+K+G+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T
Sbjct: 161 GSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHT 220
Query: 686 WHLG 697
LG
Sbjct: 221 RTLG 224
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +1
Query: 160 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSFQSK 264
+D+ WVP TKLGRLV++GKI LE I+LFS K
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 136 bits (329), Expect = 5e-31
Identities = 64/93 (68%), Positives = 75/93 (80%)
Frame = +3
Query: 234 EHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 413
E L P+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GL
Sbjct: 55 EIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGL 113
Query: 414 GVKCSKEVATAIRGAIILAKLSVLPVRRGYWGT 512
G+K +KEVA AIR II+AKLSV+P+RRGYWGT
Sbjct: 114 GIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGT 146
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G +G+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T
Sbjct: 145 GTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKT 204
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +1
Query: 163 DQKEWVPVTKLGRLVREGKIDKLESIYLFSFQSK 264
++K WVPVTKLGRLV+ GKI +E I+L S K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 126 bits (303), Expect = 8e-28
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 486 PVRRGYWGTR 515
P+R+GYWG +
Sbjct: 108 PLRQGYWGNK 117
Score = 115 bits (277), Expect = 1e-24
Identities = 53/66 (80%), Positives = 56/66 (84%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
GNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCYTSAR T
Sbjct: 115 GNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCT 174
Query: 686 WHLGKF 703
LG F
Sbjct: 175 ASLGNF 180
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 112 bits (269), Expect = 1e-23
Identities = 51/65 (78%), Positives = 55/65 (84%)
Frame = +2
Query: 491 PKRLLGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 670
P+ GN+I KPHTVP KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTS
Sbjct: 106 PRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTS 165
Query: 671 ARGST 685
ARG T
Sbjct: 166 ARGHT 170
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = +3
Query: 357 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 509
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWG
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWG 111
Score = 33.5 bits (73), Expect = 5.7
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 163 DQKEWVPVTKLGRLVREGKI 222
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 108 bits (260), Expect = 1e-22
Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Frame = +3
Query: 258 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 437
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEA 108
Query: 438 ATAIRGAIILAKLSVLPVRRGYW-GTR*ESHTPS 536
A+AIRGAI AK ++ PVR G W G + + HT S
Sbjct: 109 ASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 79.8 bits (188), Expect = 7e-14
Identities = 33/56 (58%), Positives = 45/56 (80%)
Frame = +2
Query: 518 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
GKPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T
Sbjct: 136 GKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGAT 191
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFS 252
++++ EW+P T +GRLV+ KI LE I+ FS
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFS 46
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 103 bits (247), Expect = 5e-21
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = +3
Query: 216 KNRQTREHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 395
K + E L PIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 396 NGHIGL 413
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSFQSKNS 270
K + KEW+PVTKLGRLV++ KI LE IYLFS K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 100 bits (240), Expect = 3e-20
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +2
Query: 488 SPKRLLGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 667
S ++ LGNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 668 SARGSTWHLGKF 703
SARG T L F
Sbjct: 61 SARGCTASLDYF 72
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 542 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTWHLGKF 703
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T LG F
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF 178
Score = 77.4 bits (182), Expect = 4e-13
Identities = 39/52 (75%), Positives = 40/52 (76%)
Frame = +3
Query: 216 KNRQTREHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 371
K + E L PIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSFQSKNS 270
K + KEW+PVTKLGRLV++ KI LE IYLFS K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 91.9 bits (218), Expect = 2e-17
Identities = 46/65 (70%), Positives = 50/65 (76%)
Frame = +3
Query: 216 KNRQTREHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 395
K + E L PIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 396 NGHIG 410
NG+ G
Sbjct: 62 NGYAG 66
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +1
Query: 484 YQSEEVTGEQDRKATHRPLQGHRQVWFRNSPADSCPSWYWYCVCASS*EASSDGWCTGLL 663
++++ + GEQDR+A HRPLQG R + +W+ + + + EA+ D W LL
Sbjct: 91 HRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLL 150
Query: 664 HVSSWFNLAPWEI 702
H+S + P ++
Sbjct: 151 HLSQGLHCHPGQL 163
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 86.2 bits (204), Expect = 8e-16
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 679
G+K KPHTV CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 80.6 bits (190), Expect = 4e-14
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = +3
Query: 234 EHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 413
E L PIKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVIT 121
Query: 414 GVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR 515
G+ EVA I+ IIL KL ++PV RGY G++
Sbjct: 122 GL---DEVANTIQRVIILTKLPIVPVWRGYCGSK 152
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 85.0 bits (201), Expect = 2e-15
Identities = 43/66 (65%), Positives = 49/66 (74%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G K +PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T
Sbjct: 147 GGKRLEPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCT 204
Query: 686 WHLGKF 703
LG F
Sbjct: 205 ATLGNF 210
Score = 58.8 bits (136), Expect = 1e-07
Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +3
Query: 258 IKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 428
IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+ LG+K S
Sbjct: 69 IKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYS 127
Query: 429 KEVATAIRGAIILAKLSVLPVRRGYWGTR*ESH 527
EVA IILAKLS++PV G R E H
Sbjct: 128 MEVA------IILAKLSIIPVETATGGKRLEPH 154
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 166 QKEWVPVTKLGRLVREGKIDKLESIYLFSFQSKNSRSLISSSARP 300
+ +W+P+TKLG LV+E KI LE IY FS S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 83.4 bits (197), Expect = 5e-15
Identities = 41/54 (75%), Positives = 43/54 (79%)
Frame = +2
Query: 542 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTWHLGKF 703
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T LG F
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNF 177
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/52 (67%), Positives = 37/52 (71%)
Frame = +3
Query: 216 KNRQTREHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 371
K + E L PIK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSFQSKNS 270
K + KEW+P TKLG LV++ KI LE IYLFS K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/66 (60%), Positives = 52/66 (78%)
Frame = +3
Query: 255 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 434
PIKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KE
Sbjct: 91 PIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKE 149
Query: 435 VATAIR 452
V AI+
Sbjct: 150 VQGAIQ 155
Score = 66.9 bits (156), Expect = 5e-10
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Frame = +1
Query: 166 QKEWVPVTKLGRLVREGKIDKLESIYLFSFQSKN----SRSLISSSARP*MMRFLRSCLY 333
++EWVP+TKLGRLV+ GKI LE+I+ FS K L + P + ++
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 334 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSC--QFYQSEE-VT 504
+ A+V ++ + + L W +A++ + L +L C QF S++ +
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQTQFDSSQKRIL 175
Query: 505 GEQDRKATHRPLQGHRQVWFRNSPADSCPSWYWYCVCASS*EASSDGWCTGLLH 666
G+QDR TH P+Q R+ S S YWY E ++GW LLH
Sbjct: 176 GKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 80.2 bits (189), Expect = 5e-14
Identities = 40/86 (46%), Positives = 61/86 (70%)
Frame = -2
Query: 509 SPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 330
+PVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 329 RHDLKNLIIQGRAEEEINDLEFFDWK 252
R D+ N I+Q ++ +NDLEF DW+
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFLDWQ 196
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 79.8 bits (188), Expect = 7e-14
Identities = 39/89 (43%), Positives = 59/89 (66%)
Frame = +3
Query: 234 EHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 413
E L PI+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 414 GVKCSKEVATAIRGAIILAKLSVLPVRRG 500
+ KEVA+ IR AI AKL+++PV RG
Sbjct: 71 AICKGKEVASTIRKAIDKAKLNMIPVMRG 99
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +2
Query: 518 GKPHT-VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G P T VP K+TG+ GS V L+PAP G G+V + +++L +AGV D ++ + G T
Sbjct: 107 GGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQT 163
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/84 (46%), Positives = 58/84 (69%)
Frame = -2
Query: 509 SPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 330
+PV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L L
Sbjct: 31 TPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLD 90
Query: 329 RHDLKNLIIQGRAEEEINDLEFFD 258
HDL++ ++Q A+EEI+DLE F+
Sbjct: 91 GHDLQHFVLQRAAQEEIDDLELFN 114
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 77.4 bits (182), Expect = 4e-13
Identities = 43/109 (39%), Positives = 60/109 (55%)
Frame = +3
Query: 156 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQ 335
QG + P K + + +L PIKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFSL-PIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 336 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 482
KQ +AG+R RFK V I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
GNKI KPHTV C+VT SV V I APRGT I+SAPVPKKLL+MA + D + ARG T
Sbjct: 71 GNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCT 130
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +3
Query: 279 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 458
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 459 IILAKLSVLPVRRGYWGTR 515
IIL + S+ G+ G +
Sbjct: 55 IILDRSSIAIAWGGWSGNK 73
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/82 (46%), Positives = 57/82 (69%)
Frame = +3
Query: 255 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 434
P+ E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKE
Sbjct: 43 PLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKE 101
Query: 435 VATAIRGAIILAKLSVLPVRRG 500
V AIR AI AKLS++ VR G
Sbjct: 102 VGPAIRKAIAHAKLSLIKVRVG 123
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +2
Query: 518 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T
Sbjct: 132 GSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDT 187
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 72.9 bits (171), Expect = 8e-12
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +2
Query: 584 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTWHLGKF 703
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T LG F
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF 40
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 72.9 bits (171), Expect = 8e-12
Identities = 32/82 (39%), Positives = 55/82 (67%)
Frame = +3
Query: 255 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 434
P+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE
Sbjct: 32 PLKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKE 90
Query: 435 VATAIRGAIILAKLSVLPVRRG 500
A AI+ AI AKL+++ ++RG
Sbjct: 91 AAPAIKKAIDNAKLNIIEIKRG 112
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +2
Query: 518 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
GKPHT+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T
Sbjct: 121 GKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHT 176
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = +3
Query: 249 FFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 428
+ P+KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCS
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCS 74
Query: 429 KEVATAI 449
K+V TA+
Sbjct: 75 KKVGTAV 81
Score = 49.6 bits (113), Expect = 8e-05
Identities = 34/74 (45%), Positives = 41/74 (55%)
Frame = +2
Query: 476 VSSTSPKRLLGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 655
+SS P+ GN I KP T PCK TG S++ L P IVS VP+KL+ A +
Sbjct: 90 LSSCLPRDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 656 DCYTSARGSTWHLG 697
CYTSAR T LG
Sbjct: 145 SCYTSARSYTVTLG 158
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTWHLGKF 703
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T L F
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNF 217
Score = 54.4 bits (125), Expect = 3e-06
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +3
Query: 261 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 440
K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+ A
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTA 143
Query: 441 TAI 449
TAI
Sbjct: 144 TAI 146
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/82 (45%), Positives = 56/82 (68%)
Frame = +3
Query: 255 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 434
PI E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K+
Sbjct: 40 PITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQ 98
Query: 435 VATAIRGAIILAKLSVLPVRRG 500
+ AI+ AI AK++++PVRRG
Sbjct: 99 LRVAIQKAIRDAKMNIIPVRRG 120
Score = 67.7 bits (158), Expect = 3e-10
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +2
Query: 518 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G+PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T
Sbjct: 129 GEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGET 184
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = +3
Query: 255 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 434
P+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +
Sbjct: 85 PLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQ 143
Query: 435 VATAIRGAIILAKLSVLPVRRG 500
V AI+ AI +AKL+++ V RG
Sbjct: 144 VGGAIQKAIDVAKLNIIEVDRG 165
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = +2
Query: 518 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G +++ K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T
Sbjct: 174 GGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNT 229
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +3
Query: 252 FPIKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 419
+ IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 42 YQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGI 100
Query: 420 KCSKEVATAIRGAIILAKLSVLPVRRG 500
KEV AIR AI AKL+++ ++RG
Sbjct: 101 GHGKEVGIAIRKAINYAKLNIIEIKRG 127
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 521 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
+PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T
Sbjct: 137 RPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGET 191
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 172 EWVPVTKLGRLVREGKIDKLESIYLFSFQSK 264
EW P TKLG +V+EG+I + I+ +Q K
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 69.3 bits (162), Expect = 9e-11
Identities = 30/53 (56%), Positives = 43/53 (81%)
Frame = +2
Query: 527 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST
Sbjct: 165 HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGST 217
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +3
Query: 258 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 437
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++
Sbjct: 74 IQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQM 132
Query: 438 ATAIRGAIILAKLSVLPVRRG 500
AI A A L+V P++ G
Sbjct: 133 RIAIEKATNAAYLNVNPIKMG 153
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/79 (36%), Positives = 52/79 (65%)
Frame = +3
Query: 270 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 449
++++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK S + I
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 450 RGAIILAKLSVLPVRRGYW 506
+ A+ AKL++ +RRGYW
Sbjct: 158 KAALRKAKLAITKIRRGYW 176
Score = 62.9 bits (146), Expect = 8e-09
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +2
Query: 518 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
GKP+T+ K +GK GSV V + PAP+GTGIV++ +L+++G++DC+T + G T
Sbjct: 181 GKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRT 236
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/82 (42%), Positives = 53/82 (64%)
Frame = +3
Query: 255 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 434
P+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +
Sbjct: 34 PLKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQ 92
Query: 435 VATAIRGAIILAKLSVLPVRRG 500
V AI+ AI +AKL+++ V RG
Sbjct: 93 VGGAIQKAIDIAKLNIIDVSRG 114
Score = 63.3 bits (147), Expect = 6e-09
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +2
Query: 518 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G+PHTV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T
Sbjct: 123 GRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNT 178
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = +2
Query: 527 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGST 198
Score = 59.7 bits (138), Expect = 8e-08
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +3
Query: 258 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 437
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 438 ATAIRGAIILAKLSVLPVRRG 500
AI A A L+V P++ G
Sbjct: 114 RIAIEKANNQALLNVGPIKLG 134
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +3
Query: 333 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 476
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 65.7 bits (153), Expect = 1e-09
Identities = 38/71 (53%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 494 KRLLGN-KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 670
K LG ++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY S
Sbjct: 45 KMQLGETRLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYIS 104
Query: 671 ARGSTWHLGKF 703
AR T L F
Sbjct: 105 ARCYTATLYNF 115
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +3
Query: 255 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 434
PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE
Sbjct: 14 PIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKE 73
Query: 435 VATAIRGAIIL 467
+ A+ IIL
Sbjct: 74 LLIAVCRTIIL 84
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/50 (60%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 506 GNKIGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 652
GNKIG PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 123 GNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
Score = 50.8 bits (116), Expect = 4e-05
Identities = 35/87 (40%), Positives = 44/87 (50%)
Frame = +3
Query: 255 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 434
P +II+FFLG L DEVL+ M Q QRTR K F + + L V CSKE
Sbjct: 46 PFSSSDIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKE 99
Query: 435 VATAIRGAIILAKLSVLPVRRGYWGTR 515
V TA + AI L + + GY G +
Sbjct: 100 VGTAAQRAITLLSF-LFSTQTGYKGNK 125
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = -1
Query: 696 PRCQVEPRADV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCGFP 517
P+ V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +CG
Sbjct: 14 PKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCGAC 72
Query: 516 ILFP 505
L P
Sbjct: 73 CLLP 76
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +2
Query: 518 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
G PH++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T
Sbjct: 136 GAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKT 191
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +3
Query: 333 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 500
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 37.1 bits (82), Expect = 0.46
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 169 KEWVPVTKLGRLVREGKIDKLESI 240
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 291 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 470
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 471 KLSVL--PVRRGY 503
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +2
Query: 479 SSTSPKRLLGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 658
S + K + I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG Q+
Sbjct: 124 SMEAKKTAITVPITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQN 183
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +3
Query: 258 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 413
IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 62 IKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 181 PVTKLGRLVREGKIDKLESIYLFSFQSK 264
PVTKLGRLV++GK+ ++ I+ F + K
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 9e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +3
Query: 300 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 479
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 480 VLPV 491
++ V
Sbjct: 72 LISV 75
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
T+P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 297 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 476
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 477 SVLPVRR 497
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 46.8 bits (106), Expect = 6e-04
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 545 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
V G+ G+ V L+PAP GTGI++ + ++++AG D YT +RG+
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGA 169
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSFQSK 264
K + KEW+PVTKLGRLV++ KI LE IYLFS K
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +3
Query: 279 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 458
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 459 IILAKLSVLPV 491
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
Score = 34.7 bits (76), Expect = 2.5
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 658
T+P +V K + ++PA GTG+++ + +L++AGVQ+
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQN 625
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +3
Query: 294 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 473
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 474 LSVLPV 491
++ +
Sbjct: 73 KQLVRI 78
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 682
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 49.6 bits (113), Expect = 8e-05
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +2
Query: 521 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 486 PV 491
+
Sbjct: 71 KI 72
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +3
Query: 300 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 479
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 480 VLPVR 494
+ V+
Sbjct: 138 MYKVK 142
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2
Query: 512 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTWH 691
K+ K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G
Sbjct: 142 KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTS 201
Query: 692 L 694
L
Sbjct: 202 L 202
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 486 PV 491
V
Sbjct: 77 EV 78
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
T+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGST 135
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 285 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 464
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 465 LAKLSVLPV 491
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 39.5 bits (88), Expect = 0.086
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 679
TVP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 486 --PVRRG 500
PV G
Sbjct: 79 TVPVENG 85
Score = 39.5 bits (88), Expect = 0.086
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 521 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD T + GS+
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSS 150
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 303 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 482
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 483 LPV 491
+ +
Sbjct: 91 VKI 93
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 486 PV 491
V
Sbjct: 209 QV 210
Score = 36.7 bits (81), Expect = 0.61
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 521 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
K T P + G G+ V L PA GTG+++ + +L+MAGV++ GS
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGS 267
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 458
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +2
Query: 494 KRLLGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 673
K L+ I K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 84 KNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQ 143
Query: 674 RGS 682
GS
Sbjct: 144 LGS 146
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 486 PV 491
V
Sbjct: 246 TV 247
Score = 36.3 bits (80), Expect = 0.81
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 479 SSTSPKR-LLGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 655
S+T+ +R ++ + K T P + G G+ V L PA GTG+++ + +L+MAGV+
Sbjct: 236 SATNARRNIITVPMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 295
Query: 656 D 658
+
Sbjct: 296 N 296
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 291 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 470
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 471 KLSVL--PVRRG 500
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +3
Query: 291 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 470
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 471 KLSVLPVRR 497
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
T+ V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 479
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 480 VLPVRRG 500
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 300 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 479
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 480 VLPV 491
V+ V
Sbjct: 88 VIRV 91
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +2
Query: 596 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTWHLGKF 703
G+ +V+ VPKK+L+ AG++D +TS+RGST L F
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 486 PV 491
V
Sbjct: 128 RV 129
Score = 41.9 bits (94), Expect = 0.016
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = +2
Query: 482 STSPKRLLGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 661
S + K L+ + K +++P ++G G+ V L PA GTG+++ + +L++AG+++
Sbjct: 120 SDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNV 179
Query: 662 YTSARGS 682
+ GS
Sbjct: 180 LAKSLGS 186
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 486 PV 491
V
Sbjct: 104 RV 105
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
T+ V G+ + V L PA GTG+++ + +L+ AGV D + GS
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGS 161
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.9 bits (94), Expect = 0.016
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 542 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 679
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.028
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 486 PV 491
V
Sbjct: 79 EV 80
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 494 KRLLGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 673
K+L+ + K +++ G G V + PA GTG+++ + +L++AGV++
Sbjct: 75 KQLIEVPLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQ 134
Query: 674 RGS 682
GS
Sbjct: 135 LGS 137
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 300 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 473
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
++P +V G G+ V L PA GTG+++ + +L+ AGV + T GS
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 40.3 bits (90), Expect = 0.049
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 175 WVPVTKLGRLVREGKIDKLESIYLFSFQSK 264
W PVTKLGRLV++GK+ ++ I+ F + K
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 39.5 bits (88), Expect = 0.086
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
T+P +V K G V L PA GTG+++ + +L++AGV+D + G++
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 303 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 452
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.5 bits (88), Expect = 0.086
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
++P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
TVP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
Score = 36.7 bits (81), Expect = 0.61
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 306 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 485
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 486 PV 491
V
Sbjct: 151 RV 152
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 38.3 bits (85), Expect = 0.20
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +2
Query: 521 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTWHL 694
K T+P +V G V L PA GTG+++ + +L+ AGV++ T + GS H+
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGSKNHI 194
Score = 37.5 bits (83), Expect = 0.35
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 300 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 452
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.35
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 330 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 497
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.35
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 300 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 479
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 480 VLPVRR 497
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.46
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 461 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 363
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.46
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 300 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 452
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.61
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 300 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 479
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 480 VLPV 491
++ V
Sbjct: 81 MVRV 84
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
T+ V G+ G+ V + PA GTGI++ + + ++ GV + GST
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGST 141
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 36.7 bits (81), Expect = 0.61
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 554 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 36.3 bits (80), Expect = 0.81
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 366 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGT 512
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W T
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLWHT 235
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 312 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 491
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 330 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 497
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel
protein - Mus musculus (Mouse)
Length = 982
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 508 EQDRKATHRPLQGHRQVWFRNSPADSCPSWYWYCVCASS 624
EQ+++ HRPLQG Q D+CP W +C+ S
Sbjct: 944 EQEKRLLHRPLQGSSQQGHTFHLEDACPHSPWVSLCSPS 982
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 297 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 476
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 477 SVLPVRR 497
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 527 HTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 682
HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.5
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 288 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 467
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 468 AKLSVL 485
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 285 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 449
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +3
Query: 297 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 476
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 477 SVLPVRR 497
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = +2
Query: 479 SSTSPKRLLGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 658
+ T+ + L+ + + T+ V GK G+ + L AP+GTGI++ + + ++ G++D
Sbjct: 64 NETARRVLIHVPLREGRTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKD 123
Query: 659 CYTSARGST 685
+ G++
Sbjct: 124 IVAKSMGTS 132
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 33.9 bits (74), Expect = 4.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 530 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 685
T+P + G +V L PA GTG+ + + +L GV D ++GS+
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSS 136
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 33.1 bits (72), Expect = 7.5
Identities = 26/79 (32%), Positives = 35/79 (44%)
Frame = +3
Query: 216 KNRQTREHLLVFFPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 395
K + E L P K I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 396 NGHIGLGVKCSKEVATAIR 452
GH GL CS EVATAI+
Sbjct: 98 -GHSGLSSMCSGEVATAIQ 115
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.1 bits (72), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -2
Query: 371 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEIND 273
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 312 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 458
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_A2F8H3 Cluster: Kelch motif family protein; n=1;
Trichomonas vaginalis G3|Rep: Kelch motif family protein
- Trichomonas vaginalis G3
Length = 1055
Score = 33.1 bits (72), Expect = 7.5
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = -2
Query: 476 QLSKDNSASNGSGDFLAALHTQTNM--TVVVANGNKCLETCALSGTCLFLYRHDLKNLII 303
+LS + D ++ + NM +V + N S + + R + +II
Sbjct: 627 KLSNKKKTESEVSDQISVYDPENNMFTDIVAKSPNNISPPARYSHSATLIGRKHSRMVII 686
Query: 302 QGRAEEEINDLEFFDWKENK 243
GR EE + DL +D+K+NK
Sbjct: 687 GGRHEEFLGDLWIYDFKKNK 706
>UniRef50_Q55Y36 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 711
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 608 QYQYHEGQESAGLLRNHTCR*PCKGRCVAFLSCSP 504
QY YHE E+ L H+CR P +G C+ SP
Sbjct: 609 QYHYHE--ENGTLCSLHSCRQPIEGACIVLAGRSP 641
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -2
Query: 347 TCLFLYR-HDLKNLIIQGRAEEEIND 273
TCLF R HDL +LI++G ++EEI D
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIAD 306
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 9.9
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -3
Query: 184 QEPTLSGLPCRAHDHGRDHDRVHE-DRHGLYLHRV-----IRIRRENRHVHRLEQRPPL 26
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,836,752
Number of Sequences: 1657284
Number of extensions: 16767340
Number of successful extensions: 51664
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 47974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51395
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -