Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0616
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.34 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.34 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   5.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   9.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    20   9.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   9.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.34
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +2

Query: 38  QPLSTWYLPSLYV*SPS---RNSHPSVVLLSVT*GRQLLSESSRLSTSG 175
           Q  ++W+ PS+Y  SP    R+ +PS + +S +    L S+  R S +G
Sbjct: 183 QVAASWHTPSMYPLSPGAGFRSPYPSALPISTS---SLPSDFYRFSPTG 228


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.34
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +2

Query: 38  QPLSTWYLPSLYV*SPS---RNSHPSVVLLSVT*GRQLLSESSRLSTSG 175
           Q  ++W+ PS+Y  SP    R+ +PS + +S +    L S+  R S +G
Sbjct: 75  QVAASWHTPSMYPLSPGAGFRSPYPSALPISTS---SLPSDFYRFSPTG 120


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 237 RAVNSTFFIQLRYFIHRKVFRRKKGLQTHSFSIFFT 344
           R V  T ++   YF+ R    +   + +H   IFFT
Sbjct: 139 RYVFVTSYLLFDYFVQRNQEYKYYQILSHLSGIFFT 174


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 299 KEKRATNSFLFYIFYKACNVTLFYNLYKVIHNISET 406
           KEK     ++ Y FYK  +     + +   HN++ T
Sbjct: 421 KEKADFQYYVSYDFYKMNHPVYHKDPHYGFHNVTNT 456


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 204 CRKGHQGQEVARAVNSTFFIQLRYFIHRKVF 296
           CR  ++   V + +NS F +QL   I   +F
Sbjct: 234 CRLHYKLTSVMQKINSAFSVQLLVSIGVSLF 264


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 204 CRKGHQGQEVARAVNSTFFIQLRYFIHRKVF 296
           CR  ++   V + +NS F +QL   I   +F
Sbjct: 234 CRLHYKLTSVMQKINSAFSVQLLVSIGVSLF 264


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 85  FQEFPPLGRFAVRDMR 132
           +  FPP  R  +RD R
Sbjct: 81  YPRFPPYDRMDIRDRR 96


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +1

Query: 10  NPKSIKSGDAAIVNLVPSK 66
           NP  + SG    + ++P+K
Sbjct: 59  NPSRLDSGKELYIKIIPNK 77


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 95  NSWKDSTHRGLEGTKLTMAASPDL 24
           +SW +    GLE      + +PDL
Sbjct: 73  DSWNEIDLHGLENVANLKSVNPDL 96


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 34  DAAIVNLVPSKPLC 75
           DAA+  +VP K LC
Sbjct: 143 DAALRKVVPLKKLC 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,287
Number of Sequences: 336
Number of extensions: 2089
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)