Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0616
         (462 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...    89   2e-18
U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...    89   2e-18
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...    89   2e-18
Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical pr...    45   2e-05
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...    34   0.043
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    34   0.043
Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical pr...    29   1.6  
L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical p...    29   1.6  
L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical pr...    29   1.6  
AL033514-38|CAA22111.2|  341|Caenorhabditis elegans Hypothetical...    29   1.6  
Z81142-6|CAB03508.1|  344|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AC006708-23|AAF60414.1|  975|Caenorhabditis elegans Paz/piwi dom...    29   2.1  
AF036700-1|AAB88364.1|  258|Caenorhabditis elegans Hypothetical ...    27   4.9  
AC024791-32|AAY55887.1|  212|Caenorhabditis elegans Hypothetical...    27   8.6  

>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score = 88.6 bits (210), Expect = 2e-18
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +1

Query: 13  PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 165
           PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 357 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 407


>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score = 88.6 bits (210), Expect = 2e-18
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +1

Query: 13  PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 165
           PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 391 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score = 88.6 bits (210), Expect = 2e-18
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +1

Query: 13  PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 165
           PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 391 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441


>Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical
           protein H19N07.1 protein.
          Length = 532

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +1

Query: 16  KSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 165
           K +K  +  I+ L   +P  +E F+E+P LGRF +RD  +T+A+G V+K V
Sbjct: 481 KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score = 34.3 bits (75), Expect = 0.043
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 1   LQVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 165
           L+  P+ I  G +A+V +     + +E+F     LGR   R    T+A G+++ V
Sbjct: 534 LKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 34.3 bits (75), Expect = 0.043
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 1   LQVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 165
           L+  P+ I  G +A+V +     + +E+F     LGR   R    T+A G+++ V
Sbjct: 552 LKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606


>Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical
           protein T23G5.3 protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -2

Query: 227 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 75
           +P+V  +  L   PPP    L +LM P  TV +  R  K P G NS K  T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177


>L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical
           protein ZK353.1a protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = -1

Query: 156 DDSDSNCLPHVTDSKTTEGWE 94
           D++ +N LPH+++ + TEG+E
Sbjct: 42  DETSTNFLPHISEREVTEGYE 62


>L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical
           protein ZK353.1b protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = -1

Query: 156 DDSDSNCLPHVTDSKTTEGWE 94
           D++ +N LPH+++ + TEG+E
Sbjct: 44  DETSTNFLPHISEREVTEGYE 64


>AL033514-38|CAA22111.2|  341|Caenorhabditis elegans Hypothetical
           protein Y75B8A.33 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 305 KRATNSFLFYIFYKACNVTLFYNLYKVIHNISETFC 412
           KR  NS++F I+   C +  F   Y++   +   +C
Sbjct: 262 KRDVNSYVFVIWGVVCQILFFLTTYRIAELVVRIYC 297


>Z81142-6|CAB03508.1|  344|Caenorhabditis elegans Hypothetical
           protein ZK1037.9 protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 16/56 (28%), Positives = 32/56 (57%)
 Frame = -2

Query: 290 LSVNEVSQLYEKCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLMS 123
           L+V+   ++ +K A  +S++ + ++AF  ALV +  P S ++  L TP     ++S
Sbjct: 109 LAVDIAFEIVKKTAQRASTWLILMIAFIRALV-IRYPMSSRIEKLTTPKVAFIIIS 163


>AC006708-23|AAF60414.1|  975|Caenorhabditis elegans Paz/piwi
           domain-containing protein2 protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 248 QHIFHTTAILHSPKGVSKEKRATNSFLFYIFYKACNVTLFYNL 376
           Q+  H TA L S K V+  K+    F+ +  ++ C+  LF+ L
Sbjct: 103 QYSVHITAELSSKKEVTFTKKGKEDFIVHDRHEKCSAILFHAL 145


>AF036700-1|AAB88364.1|  258|Caenorhabditis elegans Hypothetical
           protein M04G7.1 protein.
          Length = 258

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -2

Query: 167 LTALMTP-TATVCLMSRTAKRPRGGNSWKDSTHRGLEGTKLTMAASPDLMDFGLTC 3
           + AL  P T ++CL +   K P  GN+  D T RG   +  +++A    +  G  C
Sbjct: 174 MMALYCPRTCSLCLWAAATKIPNCGNTLPDCTTRGNYCSATSVSAYQKRVGCGNQC 229


>AC024791-32|AAY55887.1|  212|Caenorhabditis elegans Hypothetical
           protein Y47G6A.31 protein.
          Length = 212

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 365 FYNLYKVIHNISETFCYDC 421
           F +L K++ N   TFCY C
Sbjct: 44  FQHLPKLLENCGHTFCYSC 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,104,848
Number of Sequences: 27780
Number of extensions: 191760
Number of successful extensions: 584
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)