Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0616
         (462 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...   105   2e-25
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...   102   2e-24
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    35   5e-04
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.5  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   6.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   6.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.5  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   8.5  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   8.5  

>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score =  105 bits (252), Expect = 2e-25
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = +1

Query: 10  NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFR 174
           NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGVIKAV F+
Sbjct: 390 NPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTFK 444


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score =  102 bits (244), Expect = 2e-24
 Identities = 47/55 (85%), Positives = 52/55 (94%)
 Frame = +1

Query: 10  NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFR 174
           NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVGVIK+V F+
Sbjct: 390 NPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTFK 444


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 34.7 bits (76), Expect = 5e-04
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +1

Query: 10  NPKSIKSGDAAIVNLVPSK 66
           NPKSIKSGDAAIV L P+K
Sbjct: 101 NPKSIKSGDAAIVMLQPTK 119


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 316 CSPFFLRNTFR*MKYRSCMKN 254
           C  FF R+  + ++YR C KN
Sbjct: 87  CKGFFRRSIQQKIQYRPCTKN 107


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = -1

Query: 177 LPEVDSLDDSDSNCLPHVTDSKTT 106
           L ++ +++D+D N   H  D+K++
Sbjct: 560 LGKLSTIEDADKNQCRHYLDAKSS 583


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 10  NPKSIKSGDAAIVNLVPSKPLC 75
           NP+    G   +V L PS P C
Sbjct: 66  NPEHKPPGPKDLVYLEPSPPFC 87


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 10  NPKSIKSGDAAIVNLVPSKPLC 75
           NP+    G   +V L PS P C
Sbjct: 67  NPEHKPPGPKDLVYLEPSPPFC 88


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 32  EMQPLSTWYLPSL 70
           +  P+  WY+PSL
Sbjct: 589 DKNPVQLWYVPSL 601


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
          opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/27 (22%), Positives = 14/27 (51%)
 Frame = -3

Query: 94 IPGRTLHIEAWKVPS*QWLHLQT*WIL 14
          +P     +  W VP+ + +H+   W++
Sbjct: 13 LPAGPPRLLGWNVPAEELIHIPEHWLV 39


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 307 FFLRNTFR*MKYRSCMKN 254
           FF R+  + ++YR C KN
Sbjct: 41  FFRRSIQQKIQYRPCTKN 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,695
Number of Sequences: 438
Number of extensions: 2433
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)