Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0615
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 150 1e-36
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 149 2e-36
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 148 4e-36
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 148 5e-36
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 144 5e-35
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 142 2e-34
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 130 8e-31
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 77 1e-14
06_02_0253 + 13492707-13493183,13493293-13493636,13494136-134942... 30 1.6
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101... 29 3.8
02_02_0106 + 6814391-6817007,6817086-6817462 29 3.8
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 6.6
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 150 bits (363), Expect = 1e-36
Identities = 72/87 (82%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 436
A + PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTLI
Sbjct: 162 ADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLI 221
Query: 437 MQLLRDNLTLWTSD-TQGDGDEPAEAA 514
MQLLRDNLTLWTSD T+ GDE EA+
Sbjct: 222 MQLLRDNLTLWTSDLTEDGGDEVKEAS 248
Score = 95.1 bits (226), Expect = 5e-20
Identities = 46/93 (49%), Positives = 59/93 (63%)
Frame = +3
Query: 3 ERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV 182
E + KEYR K+E EL +IC +L LLD HL+P ++ ESKVFYLKMKGDY+RYLAE
Sbjct: 77 EEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEF 136
Query: 183 ATGETRHSVVEDSQKAYQDAFEISRRKCSPHTP 281
TG R E + AY+ A +I+ +P P
Sbjct: 137 KTGAERKEAAESTMVAYKAAQDIALADLAPTHP 169
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 149 bits (362), Expect = 2e-36
Identities = 70/92 (76%), Positives = 77/92 (83%)
Frame = +2
Query: 260 KMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIM 439
++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIM
Sbjct: 173 ELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIM 232
Query: 440 QLLRDNLTLWTSDTQGDGDEPAEAATTNISPH 535
QLLRDNLTLWTSD Q DG + AT H
Sbjct: 233 QLLRDNLTLWTSDMQDDGGDEMRDATKPEDEH 264
Score = 91.5 bits (217), Expect = 6e-19
Identities = 49/120 (40%), Positives = 70/120 (58%)
Frame = +3
Query: 21 AKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETR 200
A+ YR +VE EL IC +L LLD+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R
Sbjct: 93 ARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAER 152
Query: 201 HSVVEDSQKAYQDAFEISRRKCSPHTP*GWVWR*ISQSFIMRY*IRQTRRVNSPNRLSTM 380
+ + AYQ A +I+ ++ SP P I + + + +NSP+R T+
Sbjct: 153 KDAADATLAAYQAAQDIAMKELSPTHP-------IRLGLALNFSVFYYEILNSPDRACTL 205
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 148 bits (359), Expect = 4e-36
Identities = 73/87 (83%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 436
A + THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLI
Sbjct: 167 ADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLI 226
Query: 437 MQLLRDNLTLWTSDTQGD-GDEPAEAA 514
MQLLRDNLTLWTSD D GDE EAA
Sbjct: 227 MQLLRDNLTLWTSDNAEDGGDEIKEAA 253
Score = 91.1 bits (216), Expect = 8e-19
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +3
Query: 24 KEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRH 203
KEYR ++E EL +IC +L LLD HL+P A+ ESKVFYLKMKGDY+RYLAE +G R
Sbjct: 89 KEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERK 148
Query: 204 SVVEDSQKAYQDAFEIS 254
E++ AY+ A +I+
Sbjct: 149 EAAENTLVAYKSAQDIA 165
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 148 bits (358), Expect = 5e-36
Identities = 71/87 (81%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 436
A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTLI
Sbjct: 145 ADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLI 204
Query: 437 MQLLRDNLTLWTSDTQGD-GDEPAEAA 514
MQLLRDNLTLWTSD D GDE EAA
Sbjct: 205 MQLLRDNLTLWTSDANDDGGDEIKEAA 231
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/86 (50%), Positives = 55/86 (63%)
Frame = +3
Query: 24 KEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRH 203
+ YR K+E EL IC +L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R
Sbjct: 67 RSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERK 126
Query: 204 SVVEDSQKAYQDAFEISRRKCSPHTP 281
E + AY+ A +I+ +P P
Sbjct: 127 QAAESTMNAYKAAQDIALADLAPTHP 152
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 144 bits (350), Expect = 5e-35
Identities = 68/86 (79%), Positives = 75/86 (87%)
Frame = +2
Query: 257 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 436
A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLI
Sbjct: 168 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 227
Query: 437 MQLLRDNLTLWTSDTQGDGDEPAEAA 514
MQLLRDNLTLWTSD D E A
Sbjct: 228 MQLLRDNLTLWTSDISEDTAEEIREA 253
Score = 98.3 bits (234), Expect = 5e-21
Identities = 46/93 (49%), Positives = 62/93 (66%)
Frame = +3
Query: 3 ERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV 182
E + + K+YR K+E EL +IC +L LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE
Sbjct: 83 EDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEF 142
Query: 183 ATGETRHSVVEDSQKAYQDAFEISRRKCSPHTP 281
TG R E++ AY+ A +I+ + P P
Sbjct: 143 KTGAERKDAAENTMVAYKAAQDIALAELPPTHP 175
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 142 bits (345), Expect = 2e-34
Identities = 65/74 (87%), Positives = 72/74 (97%)
Frame = +2
Query: 257 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 436
A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLI
Sbjct: 386 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 445
Query: 437 MQLLRDNLTLWTSD 478
MQLLRDNLTLWTSD
Sbjct: 446 MQLLRDNLTLWTSD 459
Score = 100 bits (240), Expect = 1e-21
Identities = 48/93 (51%), Positives = 62/93 (66%)
Frame = +3
Query: 3 ERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV 182
E + + KEYR K+E EL +IC +L LLD HL+P ++ PESKVFYLKMKGDYYRYLAE
Sbjct: 301 EDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEF 360
Query: 183 ATGETRHSVVEDSQKAYQDAFEISRRKCSPHTP 281
TG R E++ AY+ A +I+ + P P
Sbjct: 361 KTGAERKDAAENTMVAYKAAQDIALAELPPTHP 393
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 130 bits (315), Expect = 8e-31
Identities = 62/96 (64%), Positives = 72/96 (75%)
Frame = +2
Query: 254 QAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTL 433
Q + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++YKDSTL
Sbjct: 151 QTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENYKDSTL 210
Query: 434 IMQLLRDNLTLWTSDTQGDGDEPAEAATTNISPHSP 541
IMQLLRDNL LW SD D D+ E T + P
Sbjct: 211 IMQLLRDNLALWNSDMADDADDIRERTDTTGAKGDP 246
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/78 (39%), Positives = 39/78 (50%)
Frame = +3
Query: 3 ERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV 182
E + EYR KVE E+ +IC DV+ ++DK KGDYYRYLAE
Sbjct: 54 ESHVRQTAEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEF 95
Query: 183 ATGETRHSVVEDSQKAYQ 236
TG + V E S AY+
Sbjct: 96 KTGTEKIEVSELSLNAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 77.4 bits (182), Expect = 1e-14
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +3
Query: 30 YRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSV 209
Y+ KVE ELR +C +VL ++ H +P A++ E+ VF+ KMKGDYYRYLAE +TG + +
Sbjct: 83 YKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAA 142
Query: 210 VEDSQKAYQ 236
+ S AYQ
Sbjct: 143 TDQSLMAYQ 151
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = +2
Query: 323 EILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQG 487
EI+NSP++A Q+AKQA D+A AE+++ + YKDS L+MQLL++NL LWTS+ G
Sbjct: 163 EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSELTG 217
>06_02_0253 +
13492707-13493183,13493293-13493636,13494136-13494265,
13494736-13494856,13494902-13495026
Length = 398
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +2
Query: 476 DTQGDGDEPAEAATTNISPHSPQHTHLFSSVFIRKRVTFENVVWRGIITEADASRR 643
D Q DGDE T PH SS + +R F N WR + + RR
Sbjct: 83 DQQNDGDEDDAGETETTMPHMVARPRRNSSHIVDERPPF-NSGWRDAVPYGEGRRR 137
>03_02_1012 + 13207907-13207990,13209196-13209280,13209402-13210186,
13210262-13210462,13210580-13210690,13211105-13211487,
13211594-13211702,13211786-13211866,13212088-13212156,
13212379-13212467,13212619-13212780,13212859-13212916,
13213143-13213373,13213516-13213662,13213779-13214333,
13214562-13214819,13215096-13215203,13215760-13215854,
13215946-13216102,13216466-13216666,13217542-13217670,
13218292-13218567
Length = 1457
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2
Query: 488 DGDEPAEAATTNISP 532
DGD PAEAA NISP
Sbjct: 1428 DGDNPAEAAENNISP 1442
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 567 CL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRLKL-NVVSSLTVL 725
CL +N H S +SSP PT C N+K F KL N ++SL L
Sbjct: 93 CLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSLPAL 146
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +3
Query: 51 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 155
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,606,074
Number of Sequences: 37544
Number of extensions: 375819
Number of successful extensions: 1125
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -