Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0614
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 103 6e-22
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 103 6e-22
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 103 6e-22
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 103 6e-22
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 103 6e-22
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 93 8e-19
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 46 7e-05
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 46 7e-05
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 46 7e-05
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 40 0.008
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 38 0.025
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 38 0.025
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 38 0.025
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 38 0.025
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 38 0.025
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 38 0.025
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 34 0.41
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 34 0.41
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 32 1.7
BC041372-1|AAH41372.2| 296|Homo sapiens LOC283514 protein protein. 30 5.1
AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein pr... 30 6.7
AK094713-1|BAC04405.1| 945|Homo sapiens protein ( Homo sapiens ... 29 8.9
AB082529-1|BAC02707.1| 607|Homo sapiens KIAA1998 protein protein. 29 8.9
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 103 bits (246), Expect = 6e-22
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +3
Query: 252 QRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVP 431
++V+ +E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV
Sbjct: 161 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTL 220
Query: 432 LGVPNGKQGCMFTPVDVTLTCYEPE 506
+GVP G MFTP+ V Y+ E
Sbjct: 221 MGVPGRTMGVMFTPLTVKYAYYDTE 245
Score = 96.7 bits (230), Expect = 5e-20
Identities = 43/79 (54%), Positives = 60/79 (75%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 226 YAMDVYELNRESIPLKVLL 282
+A ++YEL+++ P +++L
Sbjct: 152 FAKNMYELHKKVSPNELIL 170
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 103 bits (246), Expect = 6e-22
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +3
Query: 252 QRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVP 431
++V+ +E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV
Sbjct: 161 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTL 220
Query: 432 LGVPNGKQGCMFTPVDVTLTCYEPE 506
+GVP G MFTP+ V Y+ E
Sbjct: 221 MGVPGRTMGVMFTPLTVKYAYYDTE 245
Score = 96.7 bits (230), Expect = 5e-20
Identities = 43/79 (54%), Positives = 60/79 (75%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 226 YAMDVYELNRESIPLKVLL 282
+A ++YEL+++ P +++L
Sbjct: 152 FAKNMYELHKKVSPNELIL 170
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 103 bits (246), Expect = 6e-22
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +3
Query: 252 QRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVP 431
++V+ +E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV
Sbjct: 161 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTL 220
Query: 432 LGVPNGKQGCMFTPVDVTLTCYEPE 506
+GVP G MFTP+ V Y+ E
Sbjct: 221 MGVPGRTMGVMFTPLTVKYAYYDTE 245
Score = 96.7 bits (230), Expect = 5e-20
Identities = 43/79 (54%), Positives = 60/79 (75%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 226 YAMDVYELNRESIPLKVLL 282
+A ++YEL+++ P +++L
Sbjct: 152 FAKNMYELHKKVSPNELIL 170
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 103 bits (246), Expect = 6e-22
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +3
Query: 252 QRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVP 431
++V+ +E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV
Sbjct: 161 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTL 220
Query: 432 LGVPNGKQGCMFTPVDVTLTCYEPE 506
+GVP G MFTP+ V Y+ E
Sbjct: 221 MGVPGRTMGVMFTPLTVKYAYYDTE 245
Score = 96.7 bits (230), Expect = 5e-20
Identities = 43/79 (54%), Positives = 60/79 (75%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 226 YAMDVYELNRESIPLKVLL 282
+A ++YEL+++ P +++L
Sbjct: 152 FAKNMYELHKKVSPNELIL 170
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 103 bits (246), Expect = 6e-22
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +3
Query: 252 QRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVP 431
++V+ +E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV
Sbjct: 154 KKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTL 213
Query: 432 LGVPNGKQGCMFTPVDVTLTCYEPE 506
+GVP G MFTP+ V Y+ E
Sbjct: 214 MGVPGRTMGVMFTPLTVKYAYYDTE 238
Score = 96.7 bits (230), Expect = 5e-20
Identities = 43/79 (54%), Positives = 60/79 (75%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 85 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 144
Query: 226 YAMDVYELNRESIPLKVLL 282
+A ++YEL+++ P +++L
Sbjct: 145 FAKNMYELHKKVSPNELIL 163
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 92.7 bits (220), Expect = 8e-19
Identities = 40/85 (47%), Positives = 60/85 (70%)
Frame = +3
Query: 252 QRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVP 431
++V+ +E I+GW+A G+++T HS +IHEYYSRE P+H+T+DTSL G M ++AYV
Sbjct: 150 KKVSPNELILGWYAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHMSIKAYVSTL 209
Query: 432 LGVPNGKQGCMFTPVDVTLTCYEPE 506
+GVP G+ +FTP+ V Y+ E
Sbjct: 210 MGVP-GRTVGVFTPLTVKYAYYDTE 233
Score = 82.6 bits (195), Expect = 9e-16
Identities = 39/79 (49%), Positives = 59/79 (74%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++HPV+L VD+YERRN + RVIGTLLGT +K VEVTNCF V + E +D+V ++
Sbjct: 82 VRLHPVLLASTVDSYERRNKGAARVIGTLLGTVNKHSVEVTNCFSVSYNE-SDEVVVDME 140
Query: 226 YAMDVYELNRESIPLKVLL 282
+A ++YEL+++ P +++L
Sbjct: 141 FAKNMYELHKKVSPNELIL 159
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 46.4 bits (105), Expect = 7e-05
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE 195
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E
Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE 60
Score = 37.9 bits (84), Expect = 0.025
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 252 QRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCV 428
++VN+ E IVGW+ TG ++ + I+E R C V V +D + AY+ V
Sbjct: 83 KKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISV 141
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 46.4 bits (105), Expect = 7e-05
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE 195
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE 60
Score = 37.9 bits (84), Expect = 0.025
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 252 QRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCV 428
++VN+ E IVGW+ TG ++ + I+E R C V V +D + AY+ V
Sbjct: 83 KKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISV 141
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 46.4 bits (105), Expect = 7e-05
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE 195
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE 60
Score = 37.9 bits (84), Expect = 0.025
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 252 QRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCV 428
++VN+ E IVGW+ TG ++ + I+E R C V V +D + AY+ V
Sbjct: 83 KKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISV 141
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 39.5 bits (88), Expect = 0.008
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++ +V+ +I+ Y+ + V G LLG K +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVKDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 226 YAMDV 240
Y M++
Sbjct: 99 YQMEM 103
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 37.9 bits (84), Expect = 0.025
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 226 YAMDV 240
Y M++
Sbjct: 99 YQMEM 103
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 37.9 bits (84), Expect = 0.025
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 226 YAMDV 240
Y M++
Sbjct: 99 YQMEM 103
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 37.9 bits (84), Expect = 0.025
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 226 YAMDV 240
Y M++
Sbjct: 99 YQMEM 103
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 37.9 bits (84), Expect = 0.025
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 226 YAMDV 240
Y M++
Sbjct: 99 YQMEM 103
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 37.9 bits (84), Expect = 0.025
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 226 YAMDV 240
Y M++
Sbjct: 99 YQMEM 103
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 37.9 bits (84), Expect = 0.025
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 226 YAMDV 240
Y M++
Sbjct: 99 YQMEM 103
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 33.9 bits (74), Expect = 0.41
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 37 NISVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCF 177
++SV +HP+V+ I D + R + R VIG L+G + +EV N F
Sbjct: 8 SVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSF 57
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 33.9 bits (74), Expect = 0.41
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 37 NISVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCF 177
++SV +HP+V+ I D + R + R VIG L+G + +EV N F
Sbjct: 38 SVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSF 87
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 31.9 bits (69), Expect = 1.7
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 225
V++ +V+F+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVFK---HYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 95
Query: 226 YAMDV 240
Y M++
Sbjct: 96 YQMEM 100
>BC041372-1|AAH41372.2| 296|Homo sapiens LOC283514 protein protein.
Length = 296
Score = 30.3 bits (65), Expect = 5.1
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 386 AGWRSNGFT-CICLCTIGSAKWKARLHV 466
AG +N T C+C+C + S +W+ RL V
Sbjct: 122 AGLHANPVTPCLCMCPLFSCQWEGRLEV 149
>AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein
protein.
Length = 118
Score = 29.9 bits (64), Expect = 6.7
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 354 REPVHVTLDTSLAGGRMGLRAYVCVPLG-VPNGKQGCMFTPVDVTLTC 494
R PV V+ L G G+R+ + V L +P G+ GC FT + V L C
Sbjct: 10 RVPVRVSSAPGLGFGGAGMRSLLSVGLPPIPIGR-GCHFTLITVFLYC 56
>AK094713-1|BAC04405.1| 945|Homo sapiens protein ( Homo sapiens
cDNA FLJ37394 fis, clone BRAMY2027140, highly similar to
RHO-GUANINE NUCLEOTIDE EXCHANGE FACTOR. ).
Length = 945
Score = 29.5 bits (63), Expect = 8.9
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 142 SDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRESIPLKVLLVGGRLA 300
++K ++ V H EH DQ +L+ + D+ ++S P LL GRL+
Sbjct: 315 AEKEDIKRVKSLVVQHNEHEDQHSLDLDRSFDIL---KKSKPPSTLLAAGRLS 364
>AB082529-1|BAC02707.1| 607|Homo sapiens KIAA1998 protein protein.
Length = 607
Score = 29.5 bits (63), Expect = 8.9
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 142 SDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRESIPLKVLLVGGRLA 300
++K ++ V H EH DQ +L+ + D+ ++S P LL GRL+
Sbjct: 320 AEKEDIKRVKSLVVQHNEHEDQHSLDLDRSFDIL---KKSKPPSTLLAAGRLS 369
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,096,024
Number of Sequences: 237096
Number of extensions: 2237238
Number of successful extensions: 10964
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10959
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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