Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0614
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47808-5|CAA87773.1| 294|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 40 0.002
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 31 0.44
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 31 0.44
Z68760-4|CAE17822.1| 160|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z29121-1|CAA82387.3| 324|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81493-1|CAB04039.1| 178|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical ... 28 5.5
Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical pr... 27 7.2
AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein. 27 7.2
AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical ... 27 7.2
AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin monoox... 27 7.2
AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear recep... 27 7.2
AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear recep... 27 7.2
AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear recep... 27 7.2
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 27 7.2
AF067617-4|AAC17557.1| 381|Caenorhabditis elegans Hypothetical ... 27 7.2
Z81552-4|CAB04488.2| 765|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z47074-1|CAA87375.2| 851|Caenorhabditis elegans Hypothetical pr... 27 9.5
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z47808-5|CAA87773.1| 294|Caenorhabditis elegans Hypothetical
protein D2013.7 protein.
Length = 294
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = +1
Query: 28 MALNISVKVHPVVLFQIVDAYERR------NADSHRVIGTLLGTSDKGVVEVTNCFCVPH 189
MA N++V VHP V +VD + RR N + +GTL+G +KG ++VTNCF +P
Sbjct: 1 MASNLTVNVHPGVYMNVVDTHMRRTKSSAKNTGQEKCMGTLMGYYEKGSIQVTNCFAIPF 60
Query: 190 KEHADQVEAELNYAMDVYELNRESIP 267
E D +E + + + +++ P
Sbjct: 61 NESNDDLEIDDQFNQQMISALKKTSP 86
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Frame = +3
Query: 240 LRAEQRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECRE--------PVHV-TLDTSLA 392
+ A ++ + +E VGW+ T +++T+ + H+YY R E P+ V T+DT+ +
Sbjct: 78 ISALKKTSPNEQPVGWFLTTSDITSSCLIYHDYYVRVITEASARRESPPIVVLTIDTTFS 137
Query: 393 GG---RMGLRAYVCVPLGVPN--GKQGCMFTPVDVTLTCYEPEM 509
G RM +RAY+ G+P G +F P+ V L + E+
Sbjct: 138 GDMSKRMPVRAYLRSKAGIPGAAGPHCAIFNPLRVELAAFPGEL 181
>AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 8 protein.
Length = 362
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKG-VVEVTNCFCVPHKE 195
V VHP+VL +VD + R + RV+G LLG+ K +++ N F VP E
Sbjct: 41 VTVHPLVLLSVVDHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDE 93
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -1
Query: 557 TRDLHQTQSSGTLVDLHLRF---IACESDIYRSEHATLLSIWHSQWYTNICT*THSTSSQ 387
++D+H+++++GT+++ + + + E+ + E +WH QW+ + +
Sbjct: 2152 SKDVHRSKNAGTVLEKMMEYHSKLVREASLVTEELVRCAILWHEQWHDALDDASRVYFHD 2211
Query: 386 RSVQSNMDRL 357
+VQ+ D L
Sbjct: 2212 NNVQAMFDAL 2221
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -1
Query: 557 TRDLHQTQSSGTLVDLHLRF---IACESDIYRSEHATLLSIWHSQWYTNICT*THSTSSQ 387
++D+H+++++GT+++ + + + E+ + E +WH QW+ + +
Sbjct: 2155 SKDVHRSKNAGTVLEKMMEYHSKLVREASLVTEELVRCAILWHEQWHDALDDASRVYFHD 2214
Query: 386 RSVQSNMDRL 357
+VQ+ D L
Sbjct: 2215 NNVQAMFDAL 2224
>Z68760-4|CAE17822.1| 160|Caenorhabditis elegans Hypothetical
protein F36H1.9 protein.
Length = 160
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 170 TASACHTKNMPIKSKRNLITRWMFTS 247
T ACHT M + K+N IT W +++
Sbjct: 55 TLVACHTLQMFLAEKKNTITHWKYST 80
>Z29121-1|CAA82387.3| 324|Caenorhabditis elegans Hypothetical
protein ZK757.1 protein.
Length = 324
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 10 VLVELKMALNISVKVHPVVLFQIVDAYERRNADSHR 117
V + L + LN+ V ++ V Y++RN D HR
Sbjct: 177 VRISLTLGLNLFAVFINVAIYTFVKKYDKRNVDVHR 212
>Z81493-1|CAB04039.1| 178|Caenorhabditis elegans Hypothetical
protein F01D5.1 protein.
Length = 178
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 157 PLLCRSCPIRCR*LCENLHFDVRMRPQFEIKQQD 56
PLL SCP+ C+ LC + P F+ K D
Sbjct: 44 PLLKESCPVTCK-LCPPTEAPTTLAPCFDDKDTD 76
>AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical
protein Y67H2A.6 protein.
Length = 426
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 46 VKVHPVVLFQIVDAYERRNADS----HRVIGTLLGTSDKGVVEVTNCF 177
V +HP+V+ Q+ + Y R +V G +LG + VE N F
Sbjct: 14 VLLHPLVIMQMSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSF 61
>Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical
protein K08C7.5 protein.
Length = 529
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 211 RLDRHVLCVARRSSWLLPPLLCRSCP 134
R+ + V V RR +WL+P L R P
Sbjct: 205 RIAKQVYLVTRRGTWLIPKLETRGLP 230
>AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein.
Length = 474
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 21 IKNGSQY*CEGPSCCFISNCGRIRTSKCRF 110
++N Y C +CC I R R CRF
Sbjct: 128 VQNKKVYHCSQDNCCEIDKQNRNRCQSCRF 157
>AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical
protein Y15E3A.1a protein.
Length = 474
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 21 IKNGSQY*CEGPSCCFISNCGRIRTSKCRF 110
++N Y C +CC I R R CRF
Sbjct: 128 VQNKKVYHCSQDNCCEIDKQNRNRCQSCRF 157
>AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 529
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 211 RLDRHVLCVARRSSWLLPPLLCRSCP 134
R+ + V V RR +WL+P L R P
Sbjct: 205 RIAKQVYLVTRRGTWLIPKLETRGLP 230
>AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 476
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 21 IKNGSQY*CEGPSCCFISNCGRIRTSKCRF 110
++N Y C +CC I R R CRF
Sbjct: 130 VQNKKVYHCSQDNCCEIDKQNRNRCQSCRF 159
>AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 21 IKNGSQY*CEGPSCCFISNCGRIRTSKCRF 110
++N Y C +CC I R R CRF
Sbjct: 129 VQNKKVYHCSQDNCCEIDKQNRNRCQSCRF 158
>AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 21 IKNGSQY*CEGPSCCFISNCGRIRTSKCRF 110
++N Y C +CC I R R CRF
Sbjct: 129 VQNKKVYHCSQDNCCEIDKQNRNRCQSCRF 158
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 419 CLCTIGSAKWKARLHVHSCRCHSH 490
C CT +W +H CR H H
Sbjct: 1556 CYCTNILTRWSKAVHCKKCRIHVH 1579
>AF067617-4|AAC17557.1| 381|Caenorhabditis elegans Hypothetical
protein T04D1.2 protein.
Length = 381
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 65 FYFKLWTHTNVEMQILTELSAPYWARA 145
FY +W+ T V + LT YW R+
Sbjct: 118 FYDMMWSQTTVSYRFLTTPPVTYWIRS 144
>Z81552-4|CAB04488.2| 765|Caenorhabditis elegans Hypothetical
protein F56G4.6 protein.
Length = 765
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 313 LVTSLPVAHQPTILSEELTLCSARKHPSR 227
+VTS + P++LS+ +T+CS HP+R
Sbjct: 444 VVTSSEIQIDPSLLSD-MTICSLGLHPTR 471
>Z47074-1|CAA87375.2| 851|Caenorhabditis elegans Hypothetical
protein K07C10.1 protein.
Length = 851
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 7 VVLVELKMALNISVKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVE--VTNCFC 180
V ++++ MA+ SV V + A E+ H VI ++L + VVE +T C
Sbjct: 724 VTMIDVIMAIGFSVDYSAHVCYHYYCAREQHLGSKHEVITSVLQAVGRPVVEASLTTLLC 783
Query: 181 V 183
+
Sbjct: 784 M 784
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 241 YELNRESIPLKVLLVGGRLAMK*PTTPLLYTSIIPVNAVSLSMLLWTLR 387
+ELN+ I L + G+ + TTP + I N +L+ L+ +R
Sbjct: 57 FELNKPPIILDKFIAQGKTTITFQTTPAVMVCISKANPEALAQLIEAIR 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,310,684
Number of Sequences: 27780
Number of extensions: 355624
Number of successful extensions: 1041
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -