Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0614
(575 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.54
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 1.6
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 1.6
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 23 2.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 3.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.6
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 21 6.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 6.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 6.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 6.6
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 8.7
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.0 bits (52), Expect = 0.54
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 407 FTCICLCTIGSAKWKARLHVHSCRCHSHM 493
+ CI +GSA+ ARL+V+ HM
Sbjct: 469 YKCIAASKVGSAEHSARLNVYGLPFIRHM 497
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 1.6
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Frame = +3
Query: 21 IKNGSQY*CEGPSCCFISNCGRIRTSKCRFSQSY-----RHLIGHERQRSGGSNQLLLRA 185
++ Y C C I R R CR+ + R + ERQR+ +Q + +
Sbjct: 138 VRKDLSYACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVES 197
Query: 186 T 188
T
Sbjct: 198 T 198
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 1.6
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Frame = +3
Query: 21 IKNGSQY*CEGPSCCFISNCGRIRTSKCRFSQSY-----RHLIGHERQRSGGSNQLLLRA 185
++ Y C C I R R CR+ + R + ERQR+ +Q + +
Sbjct: 138 VRKDLSYACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVES 197
Query: 186 T 188
T
Sbjct: 198 T 198
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 23.0 bits (47), Expect = 2.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 428 TIGSAKWKARLHVHSCRCH 484
++G+ K R H C+CH
Sbjct: 28 SLGALKMHIRTHTLPCKCH 46
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 181 RRSSWLLPPLLCRSCPIRCR 122
RRS + PP +CP+ C+
Sbjct: 333 RRSEPVEPPRRKNNCPLHCK 352
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 364 SMLLWTLRWLEVEWV 408
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 364 SMLLWTLRWLEVEWV 408
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 364 SMLLWTLRWLEVEWV 408
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 364 SMLLWTLRWLEVEWV 408
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 364 SMLLWTLRWLEVEWV 408
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 364 SMLLWTLRWLEVEWV 408
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 404 GFTCICLCTIGSAKWKARLHVHSCRC 481
GF C+C+ + + K RLH C
Sbjct: 9 GF-CVCVGALTIEELKTRLHTEQSVC 33
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 364 SMLLWTLRWLEVEWV 408
+ +L T WL++EWV
Sbjct: 98 NQILTTNAWLKLEWV 112
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 364 SMLLWTLRWLEVEWV 408
+ +L T WL++EWV
Sbjct: 98 NQILTTNAWLKLEWV 112
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 258 VNSSESIVGWWATGNEVTNHSSVIHEYYSR 347
V SSE + W A E+ S ++ Y R
Sbjct: 430 VKSSELSISWDAPITEIGGDSDLVERYEVR 459
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 364 SMLLWTLRWLEVEWVYVHM 420
+ LL T WL++EW V+M
Sbjct: 67 NQLLITNLWLKLEWNDVNM 85
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 474 VDVTLTCYEPEM*VYKCARRLC 539
VDVTL C E + +K C
Sbjct: 36 VDVTLACNEASLKAHKVVLSAC 57
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 325 LYTSIIPVNAVSLSMLLW 378
L TSII +N +L ++W
Sbjct: 277 LKTSIILMNGTTLPQIMW 294
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,654
Number of Sequences: 438
Number of extensions: 4417
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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