Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0613
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 42 5e-04
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 41 0.001
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 41 0.001
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 36 0.043
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 35 0.056
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 35 0.056
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 35 0.056
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 30 2.1
Z74034-1|CAA98479.1| 313|Caenorhabditis elegans Hypothetical pr... 28 6.5
U12964-14|AAU05575.1| 692|Caenorhabditis elegans Arginyl aa-trn... 28 8.6
U12964-13|AAA91224.2| 713|Caenorhabditis elegans Arginyl aa-trn... 28 8.6
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 89 SEGTFIPHENCNQFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV-DCGDR 241
S+G E N F++CS I CP+ L++N CDWP+ V DC ++
Sbjct: 181 SDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK 232
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 330 VAHEDCDK-FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTR 467
++ +C F+ CS G CP+NL F+P +C+W KNV +C +
Sbjct: 185 ISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK 232
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 351 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVPGEENVNTG 500
+F C SG + CP +L + + C+W NV ECG GEEN +G
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE---GEENEFSG 88
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 83 GNSEGTFIPHENCNQFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYVDCGDRKLQG 253
G +G F + F C+N IP+ + CP L+++ + CD+ VD D + G
Sbjct: 240 GEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLESSG 296
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 354 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-EC 458
F C++G P+ + CP L FS Q C++ NV EC
Sbjct: 255 FSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 345 CDKFYM-CSSGNPVTLKCPSNLFFSPITQTCEWSKNV-EC 458
C Y+ C+SG+P L C + L + P + C W + EC
Sbjct: 132 CSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDEC 171
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 119 CNQFYT-CSNAIPVTLTCPSTLLYNLLTEKCDWPRYVD 229
C+ Y C++ P L+C + L+Y+ +KC W +D
Sbjct: 132 CSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMID 169
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 125 QFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV-DCGD 238
+F C + + CP L+Y+ E CDW V +CG+
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGE 79
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 628 CPSNLFYDPQKERCDFPANV 687
CP+NL ++P CD+P NV
Sbjct: 207 CPANLVFNPAISSCDWPKNV 226
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 86 NSEGTFIPH-ENCNQFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV 226
+ G+FI NC FY C V +TCPS ++N L CDWP V
Sbjct: 1246 SEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 41.1 bits (92), Expect = 9e-04
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 DCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV 452
+C+ FY C G V + CPS F+P+ C+W V
Sbjct: 1257 NCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 41 TNTSPSEVKAICARGNSEGTFIPHENCNQ-FYTCSNAIPVTLTCPSTLLYNLLTEKCDWP 217
+N P + C G +G + + CN FY+CSN + CP ++N+ + CD+
Sbjct: 182 SNEQPDSIDFDC-NGLEDGNYA--DGCNDVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQ 238
Query: 218 RYVDCGDRKLQGATVTETT 274
D + +T T TT
Sbjct: 239 CTTDDPTTTVSYSTSTITT 257
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 351 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTR 467
K+ CS+G + +C +L+F+ TQ C + V ECG++
Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 56 SEVKAICARGNSEGTFIPHENCNQFYTC-SNAIPVTLTCPSTLLYNLLTEKCDWPRYV 226
++ A C G +G + +C+ C + +C S+L +N LT KCD+P+ V
Sbjct: 1176 NDQSAFCD-GKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKV 1232
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 32 NNNTNTSPSEVKAICARGNSEGTFIPHENCNQFYT-CSNAIPVTLTCPSTLLYNLLTEKC 208
N+ +TS + + C+ ++ G F C+Q Y CSN + C +L +N T++C
Sbjct: 678 NDVPSTSAAPIGDRCSL-DASGLF--SLGCSQKYIQCSNGAAIVRRCGESLYFNEATQEC 734
Query: 209 DWPRYV-DCGDRKLQGATVTET 271
+ V +CG + + V T
Sbjct: 735 TYRDEVPECGSQGSTSSPVITT 756
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 607 GKTLSLACPSNLFYDPQKERCDFPANV-SCEGRVA 708
G+ + + CPS ++P CD+P+ V SC G+ +
Sbjct: 1267 GRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQAS 1301
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 348 DKFYMCSSGNPVTLKCPSNLFFSPITQTCEWS 443
++F C +G KCP +L F+ TQ C S
Sbjct: 113 NQFISCVAGGAYMAKCPDSLVFNERTQDCRES 144
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 354 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV 452
FY+C++G V CP+NL F+P C++S NV
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNV 623
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 44 NTSPSEVKA-ICARGNSEGTFIPHENCNQFYTCSNAIPVTLTCPSTLLYNLLTEKCDW 214
N P+EVK G G +I F+TC + CP L++N T CD+
Sbjct: 421 NERPAEVKVDFDCTGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDF 478
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 128 FYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV-DC 232
FY C+N V TCP+ L++N +CD+ V DC
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 35.9 bits (79), Expect = 0.032
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 DCDKFYM-CSSGNPVTLKCPSNLFFSPITQTCEWSKNVE 455
DC+ +Y+ C++ +CP+ LF+S + C++ ++VE
Sbjct: 799 DCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVE 837
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 339 EDCDK-FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVE 455
E C K F+ C G CP +L F+ T TC++++N E
Sbjct: 444 EACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 35 NNTNTSPSEVKAICARGNSEGTFIPHENCNQFYTCSNAIPVTLT-CPSTLLYNLLTEKCD 211
N + T+PS A G + +C +Y N T+ CP+ L Y+ L +CD
Sbjct: 774 NPSVTTPSPQHAAFCERLENGNY--GLDCEDYYISCNNFETTINRCPAGLFYSKLNNRCD 831
Query: 212 WPRYV-DCGDRK 244
+ +V DC + K
Sbjct: 832 YKEHVEDCPEYK 843
Score = 34.7 bits (76), Expect = 0.075
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 342 DCDKFYM-CSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCNVIR 518
DC+K+ + C + CPS L++S + C+ +NVE P + VI
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVEGCPEYKPTTDATPAAEQPVIS 759
Query: 519 NRHYLYVLKKVRTAN 563
++Y Y + N
Sbjct: 760 YQNYGYSQSTTKAYN 774
Score = 34.3 bits (75), Expect = 0.099
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 604 HGKTLSLACPSNLFYDPQKERCDFPANV-SCEG 699
+G+ ++ CP+NL ++P CD+ NV C+G
Sbjct: 596 NGQVVATTCPANLIFNPYVGECDYSTNVRDCQG 628
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 101 FIPHENCNQ-FYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV-DC 232
F + C+ F+ CSN TCP L+Y L CD+P V DC
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 41 TNTSPSEVKAICARGNSEGTFIPHENCNQFYT-CSNAIPVTLTCPSTLLYNLLTEKCDWP 217
T T + A+CA+ +G + +C ++ C N CPS L Y+ L +KCD
Sbjct: 678 TTTLSPKYAAMCAK-RDDGNY--GFDCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVK 734
Query: 218 RYVD-CGDRK 244
V+ C + K
Sbjct: 735 ENVEGCPEYK 744
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 610 KTLSLACPSNLFYDPQKERCDFPANV 687
KT CPS L+Y +++CD NV
Sbjct: 712 KTFKFPCPSGLYYSRLQDKCDVKENV 737
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 348 DKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKN 449
+ +Y C++G KCP + PI + C++ N
Sbjct: 129 ENYYQCANGISYMRKCPYQQVYVPILKRCDYHTN 162
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 119 CNQ-FYTCSNAIPVTLTCPSTLLYNLLTEKCDW 214
CN+ +Y C+N I CP +Y + ++CD+
Sbjct: 127 CNENYYQCANGISYMRKCPYQQVYVPILKRCDY 159
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 604 HGKTLSLACPSNLFYDPQKERCDFPANV 687
+GK CP L Y + CDFP +V
Sbjct: 226 NGKLFRKTCPEKLIYVLDQNLCDFPESV 253
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 59 EVKAICARGNSEGTFIPHENCN-QFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV 226
E++ C G ++G P+ C+ F TCS I + CP++L++N CDWPR V
Sbjct: 242 ELEPTC-EGKADGIH-PNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDV 296
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 354 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVP 476
F CS G + CP++L F+P C+W ++V EC P
Sbjct: 264 FLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 34.7 bits (76), Expect = 0.075
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 125 QFYTCSNAIPVTLTCPSTLLYNLLTEKCDW 214
QF TCS I + CP+ L+YN CDW
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 354 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVPGEEN 488
F C++G + + CP+ L FS T C++ NV EC + GEE+
Sbjct: 324 FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC--QETSGEES 367
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 327 LVAHEDCD-KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV 452
L A +C+ +F CS G + CP++L ++ C+W NV
Sbjct: 31 LYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 31.1 bits (67), Expect = 0.92
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 354 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVE 455
++ C++ L CP+ LF+ +Q C W VE
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 604 HGKTLSLACPSNLFYDPQKERCDFPANVS 690
+G+ + + CP+ L + RCD+ +NVS
Sbjct: 329 NGRAIVMFCPAGLKFSESTVRCDYESNVS 357
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 119 CNQFYT-CSNAIPVTLTCPSTLLYNLLTEKCDWPRYVD 229
C +Y C+ L+CP+ L Y+ ++KC W V+
Sbjct: 151 CTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 92 EGTFIPHENCNQFYTCSNAIPVTLTCPSTLLYNLLTEKCDW 214
+G F + + F C+N + + CP+ L ++ T +CD+
Sbjct: 312 DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 59 EVKAICARGNSEGTFIPHENCN-QFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV 226
E++ C G ++G P+ C+ F TCS I + CP++L++N CDWPR V
Sbjct: 242 ELEPTC-EGKADGIH-PNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDV 296
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 354 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVP 476
F CS G + CP++L F+P C+W ++V EC P
Sbjct: 264 FLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 34.7 bits (76), Expect = 0.075
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 125 QFYTCSNAIPVTLTCPSTLLYNLLTEKCDW 214
QF TCS I + CP+ L+YN CDW
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 354 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVPGEEN 488
F C++G + + CP+ L FS T C++ NV EC + GEE+
Sbjct: 324 FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC--QETSGEES 367
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 327 LVAHEDCD-KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV 452
L A +C+ +F CS G + CP++L ++ C+W NV
Sbjct: 31 LYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 31.1 bits (67), Expect = 0.92
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 354 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVE 455
++ C++ L CP+ LF+ +Q C W VE
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 604 HGKTLSLACPSNLFYDPQKERCDFPANVS 690
+G+ + + CP+ L + RCD+ +NVS
Sbjct: 329 NGRAIVMFCPAGLKFSESTVRCDYESNVS 357
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 119 CNQFYT-CSNAIPVTLTCPSTLLYNLLTEKCDWPRYVD 229
C +Y C+ L+CP+ L Y+ ++KC W V+
Sbjct: 151 CTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 92 EGTFIPHENCNQFYTCSNAIPVTLTCPSTLLYNLLTEKCDW 214
+G F + + F C+N + + CP+ L ++ T +CD+
Sbjct: 312 DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 35.5 bits (78), Expect = 0.043
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +2
Query: 41 TNTSPSEVKAICARGNSEGTFIPHENCNQFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPR 220
T T+ S +C+ G S+G + NC F C ++ +++CPS L Y+ + C
Sbjct: 471 TTTTASNTN-VCS-GKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTST 528
Query: 221 YVDCGDRKLQGATVT 265
C + T T
Sbjct: 529 ASGCSVTTTRAPTTT 543
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 92 EGTFIPHENCNQFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYVDC 232
+G F +C +F C N I CP+ L ++ T CD P C
Sbjct: 569 DGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 342 DCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVEC 458
DC KF C +G +CP+ L F T C+ +C
Sbjct: 577 DCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 35.1 bits (77), Expect = 0.056
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 351 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECG 461
+F CS G + CP++L + P CE+S NV +CG
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 125 QFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV-DCG 235
QF TCS I + CP+ L+Y+ C++ V CG
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 628 CPSNLFYDPQKERCDFPANV-SCEG 699
CP++L YDP+ C++ NV C G
Sbjct: 91 CPADLIYDPRIVACEYSYNVPQCGG 115
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 35.1 bits (77), Expect = 0.056
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 351 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECG 461
+F CS G + CP++L + P CE+S NV +CG
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 339 EDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-EC 458
E D + CS+G + ++CP+ L F C++ NV EC
Sbjct: 226 ECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 125 QFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV-DCG 235
QF TCS I + CP+ L+Y+ C++ V CG
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 56 SEVKAICARGNSEGTFIPHENCNQFYT-CSNAIPVTLTCPSTLLYNLLTEKCDW 214
S V C G ++G F C+ YT CSN + + CP+ L ++ CD+
Sbjct: 208 SAVTKSCV-GKADG-FYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDY 259
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 628 CPSNLFYDPQKERCDFPANV-SCEG 699
CP++L YDP+ C++ NV C G
Sbjct: 91 CPADLIYDPRIVACEYSYNVPQCGG 115
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 35.1 bits (77), Expect = 0.056
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 351 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECG 461
+F CS G + CP++L + P CE+S NV +CG
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 339 EDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-EC 458
E D + CS+G + ++CP+ L F C++ NV EC
Sbjct: 226 ECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 125 QFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV-DCG 235
QF TCS I + CP+ L+Y+ C++ V CG
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 56 SEVKAICARGNSEGTFIPHENCNQFYT-CSNAIPVTLTCPSTLLYNLLTEKCDW 214
S V C G ++G F C+ YT CSN + + CP+ L ++ CD+
Sbjct: 208 SAVTKSCV-GKADG-FYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDY 259
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 628 CPSNLFYDPQKERCDFPANV-SCEG 699
CP++L YDP+ C++ NV C G
Sbjct: 91 CPADLIYDPRIVACEYSYNVPQCGG 115
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 517 RITLQGPVLTFSSPGTTLVPHSTFLDHSQV 428
R TL G LT S+PG T+ STF+ + V
Sbjct: 3985 RWTLNGTALTHSTPGITVASDSTFIQINNV 4014
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 517 RITLQGPVLTFSSPGTTLVPHSTFLDHSQV 428
R TL G LT S+PG T+ STF+ + V
Sbjct: 3985 RWTLNGTALTHSTPGITVASDSTFIQINNV 4014
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 517 RITLQGPVLTFSSPGTTLVPHSTFLDHSQV 428
R TL G LT S+PG T+ STF+ + V
Sbjct: 3985 RWTLNGTALTHSTPGITVASDSTFIQINNV 4014
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 517 RITLQGPVLTFSSPGTTLVPHSTFLDHSQV 428
R TL G LT S+PG T+ STF+ + V
Sbjct: 3985 RWTLNGTALTHSTPGITVASDSTFIQINNV 4014
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 517 RITLQGPVLTFSSPGTTLVPHSTFLDHSQV 428
R TL G LT S+PG T+ STF+ + V
Sbjct: 3985 RWTLNGTALTHSTPGITVASDSTFIQINNV 4014
>Z74034-1|CAA98479.1| 313|Caenorhabditis elegans Hypothetical
protein F43A11.1 protein.
Length = 313
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/71 (22%), Positives = 36/71 (50%)
Frame = +1
Query: 340 KTAINFTCAHLEIP*LLNVLRTYSLAQSPKLVNGPRMSNVALESFQVRKTSILVLVM*SE 519
KTA+N C + ++ ++ + + PK++ G + + +ES+ + ++ L L +E
Sbjct: 49 KTALNIICFFRAVSNIIILINAFMITFLPKIILGFSIFPLMIESWLINTSTTLYLG--NE 106
Query: 520 TGIIFMCSRRF 552
I+ + RF
Sbjct: 107 YQIVLIALNRF 117
>U12964-14|AAU05575.1| 692|Caenorhabditis elegans Arginyl aa-trna
synthetase protein1, isoform b protein.
Length = 692
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 173 STLLYNLLTEKCDWPRYVDCGDRKLQGATV 262
+ L Y +L EKCDW YV + L TV
Sbjct: 444 AALKYRMLEEKCDWNIYVVDSGQSLHLETV 473
>U12964-13|AAA91224.2| 713|Caenorhabditis elegans Arginyl aa-trna
synthetase protein1, isoform a protein.
Length = 713
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 173 STLLYNLLTEKCDWPRYVDCGDRKLQGATV 262
+ L Y +L EKCDW YV + L TV
Sbjct: 444 AALKYRMLEEKCDWNIYVVDSGQSLHLETV 473
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,937,140
Number of Sequences: 27780
Number of extensions: 392986
Number of successful extensions: 1164
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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