Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0613
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   1.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   7.3  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   7.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   7.3  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   9.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.7  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +1

Query: 247 PGSNGNGNNKDEDTT----AVICSKKESEEF 327
           P +  +G+N+DED T     V+ S  +S EF
Sbjct: 427 PTNTASGSNEDEDETPLDPVVVISNDKSTEF 457



 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 131 YTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYV 226
           + C   I + +TC ++ ++NL+    D  RY+
Sbjct: 257 FVCDFYIAMDVTCSTSSIFNLVAISID--RYI 286


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 271  NKDEDTTAVICSKKESEEF*WLTKTAIN 354
            N D+DT AV+   KE+ +    TK   N
Sbjct: 997  NNDKDTNAVVTQSKEARDNITATKQLNN 1024


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 509 ITRTSIDVFLTWND 468
           ITR S+D F T ND
Sbjct: 557 ITRNSLDCFFTMND 570


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 509 ITRTSIDVFLTWND 468
           ITR S+D F T ND
Sbjct: 557 ITRNSLDCFFTMND 570


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +3

Query: 288 NSCDLLEKR 314
           NSCDLL+KR
Sbjct: 10  NSCDLLKKR 18


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +3

Query: 288 NSCDLLEKR 314
           NSCDLL+KR
Sbjct: 10  NSCDLLKKR 18


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +3

Query: 288 NSCDLLEKR 314
           NSCDLL+KR
Sbjct: 131 NSCDLLKKR 139


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 427 WVIGLKNKFEGHLRVTGFPDEH 362
           W +G KN   G +  + F DE+
Sbjct: 43  WSVGKKNSNSGTINESEFNDEN 64


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = +3

Query: 417 PITQTCEWSKNVECGTRVVPGEENVNTGPCNVIRNRHYLYV 539
           PI +  E  K VEC        EN  +  CN    + +  V
Sbjct: 206 PIERILEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLV 246


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = +3

Query: 417 PITQTCEWSKNVECGTRVVPGEENVNTGPCNVIRNRHYLYV 539
           PI +  E  K VEC        EN  +  CN    + +  V
Sbjct: 206 PIERILEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLV 246


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,757
Number of Sequences: 438
Number of extensions: 4381
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)