Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0612
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   3.9  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   3.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   3.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   3.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.0  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 122 VDPPDPGGGYILDPSNSPIPMDTESVHPSRKRQTPP 15
           VD  D  G   L PS++   +  + +HPS  R   P
Sbjct: 44  VDDDDTDGRESLSPSSAHTVLIPQPLHPSVPRLGHP 79


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 293 LSDRSKCFGYLYNLGCFI 240
           LSDR K F  L+NL  F+
Sbjct: 177 LSDRYKVFVDLFNLSTFL 194


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 293 LSDRSKCFGYLYNLGCFI 240
           LSDR K F  L+NL  F+
Sbjct: 337 LSDRYKVFVDLFNLSTFL 354


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 293 LSDRSKCFGYLYNLGCFI 240
           LSDR K F  L+NL  F+
Sbjct: 337 LSDRYKVFVDLFNLSTFL 354


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 136 TLFTLNYYIIILTNKTTHLYKHKT 207
           +L+  NYY+I++T      YK +T
Sbjct: 74  SLYCFNYYVIVVTT----FYKRRT 93


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 427  FFFFYRLCIEIVGKLFH 477
            FFF   L I+ V  LFH
Sbjct: 1332 FFFALILVIQFVAMLFH 1348


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 427  FFFFYRLCIEIVGKLFH 477
            FFF   L I+ V  LFH
Sbjct: 1332 FFFALILVIQFVAMLFH 1348


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 427  FFFFYRLCIEIVGKLFH 477
            FFF   L I+ V  LFH
Sbjct: 1332 FFFALILVIQFVAMLFH 1348


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 427  FFFFYRLCIEIVGKLFH 477
            FFF   L I+ V  LFH
Sbjct: 1332 FFFALILVIQFVAMLFH 1348


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 281 SKCFGYLYNLGCFIGFHS 228
           ++ FG++  +GC I F++
Sbjct: 531 NRIFGFIIIIGCLIQFNT 548


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,426
Number of Sequences: 336
Number of extensions: 3317
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)