Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0612
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28944-3|AAN63455.1|  205|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U28944-2|AAL08028.1|  339|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U28944-1|AAA68368.1|  342|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical...    27   8.9  

>U28944-3|AAN63455.1|  205|Caenorhabditis elegans Hypothetical
           protein C18A3.4c protein.
          Length = 205

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/55 (25%), Positives = 30/55 (54%)
 Frame = -3

Query: 604 IFVFYLPDNRIWMVNSLVSFEFI*WSSLSCIAIILHVVFQLKHEIIFQQFQYITY 440
           +   Y+P  R+W ++ L+SF +  ++    I ++LH +F   H ++ +  Q + Y
Sbjct: 95  LVAMYMP--RVWFLSHLLSFLYFSFALWVIICLLLH-IFDGHHALVTKMMQRLQY 146


>U28944-2|AAL08028.1|  339|Caenorhabditis elegans Hypothetical
           protein C18A3.4b protein.
          Length = 339

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/55 (25%), Positives = 30/55 (54%)
 Frame = -3

Query: 604 IFVFYLPDNRIWMVNSLVSFEFI*WSSLSCIAIILHVVFQLKHEIIFQQFQYITY 440
           +   Y+P  R+W ++ L+SF +  ++    I ++LH +F   H ++ +  Q + Y
Sbjct: 95  LVAMYMP--RVWFLSHLLSFLYFSFALWVIICLLLH-IFDGHHALVTKMMQRLQY 146


>U28944-1|AAA68368.1|  342|Caenorhabditis elegans Hypothetical
           protein C18A3.4a protein.
          Length = 342

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/55 (25%), Positives = 30/55 (54%)
 Frame = -3

Query: 604 IFVFYLPDNRIWMVNSLVSFEFI*WSSLSCIAIILHVVFQLKHEIIFQQFQYITY 440
           +   Y+P  R+W ++ L+SF +  ++    I ++LH +F   H ++ +  Q + Y
Sbjct: 95  LVAMYMP--RVWFLSHLLSFLYFSFALWVIICLLLH-IFDGHHALVTKMMQRLQY 146


>AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical
           protein Y46G5A.10 protein.
          Length = 732

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 83  PSNSPIPMDTESVHPSRKRQTPPNSDY 3
           PS   IP+ T    P  KRQ+P   DY
Sbjct: 507 PSEVRIPVTTTHTRPIAKRQSPEELDY 533


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,787,044
Number of Sequences: 27780
Number of extensions: 295518
Number of successful extensions: 697
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)