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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0611
         (481 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical ...    29   1.7  
Z81050-8|CAB02859.1|  371|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z82051-3|CAB04817.1|  337|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical
           protein C46E10.2 protein.
          Length = 123

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1

Query: 184 FYNIYWSKYNIFSTTF 231
           F+NIYWS Y IF  TF
Sbjct: 11  FFNIYWSFYAIFGFTF 26


>Z81050-8|CAB02859.1|  371|Caenorhabditis elegans Hypothetical
           protein C50B6.10 protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 130 ISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSRY 261
           + F+YR +  F + +   F+N  W  + IF    F   W+ S Y
Sbjct: 111 VQFVYRYWAIF-HVRRLSFFNGIWILFWIFLAMMFGVDWSCSVY 153


>Z82051-3|CAB04817.1|  337|Caenorhabditis elegans Hypothetical
           protein T23D5.6 protein.
          Length = 337

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 130 ISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSRY 261
           + FIYR FI   + K+  ++N ++   ++    +F F W    Y
Sbjct: 109 VQFIYR-FIAVFHPKDLKYFNGWYFLLSVLYALWFGFQWAIGLY 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,979,390
Number of Sequences: 27780
Number of extensions: 132137
Number of successful extensions: 310
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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