Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0609
(740 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.003
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 38 0.006
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.020
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.020
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 37 0.020
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 36 0.026
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 35 0.060
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.060
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.14
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 34 0.14
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.18
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 33 0.24
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.42
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.98
SB_20457| Best HMM Match : fn3 (HMM E-Value=5.1e-12) 31 0.98
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 31 0.98
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.98
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 31 1.3
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.7
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.3
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.3
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 30 2.3
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.0
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.0
SB_12798| Best HMM Match : Ammonium_transp (HMM E-Value=0) 29 5.2
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_21704| Best HMM Match : Ammonium_transp (HMM E-Value=0) 29 5.2
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.9
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 28 6.9
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 28 9.1
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 28 9.1
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +3
Query: 261 QRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG---VMRVR 431
+RI GG TI+++P + A ++ S Q CG S++ ++TAAHC RV
Sbjct: 39 RRIMGGQRSTIEQHPWMVAMMLDS-----AQACGGSLVPEDWIVTAAHCFDSNRLRWRVV 93
Query: 432 VGSSFGNSGGRVHQVSRYITHPNY 503
G+ + VS HP Y
Sbjct: 94 AGNDMPSKAVNTTGVSAIWRHPQY 117
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG 416
RI GG+ I+ +P A L + +G Q+ CG S+++ VLTAAHCL G
Sbjct: 29 RIVGGTEAPINGWPWQAMLLRSPNGDQF---CGGSLIDPGWVLTAAHCLVG 76
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF----GVMRVR 431
RI GG+ +P A L ++ G Q+ CG ++++ + V+TAAHC++ ++R
Sbjct: 139 RIVGGTKAPPGAWP-WQAMLRSNYGGQF---CGGTLVHPQWVITAAHCVYRRGPNDFKIR 194
Query: 432 VGSSF--GNSG-GRVHQVSRYITHPNY 503
+G+ F G+ G + +SR ITHP+Y
Sbjct: 195 MGAHFRKGDYGTEQDFSLSRVITHPSY 221
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Frame = +3
Query: 249 TNNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG---- 416
+++ RI GG+ +P A L T+ G + CG S++++ VLTAAHC+
Sbjct: 385 SSSTSRIVGGAAANPGDWP-WQAQLRTTTGFPY---CGGSLIHSNWVLTAAHCISSKRPA 440
Query: 417 --VMRVRVGSSFGNSGGRVH--QVSRYITHPNY 503
V+R+ S G+ + +VS ITH NY
Sbjct: 441 EVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNY 473
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF 413
RI GG+ +P A LI D W CG ++++ V+TAAHC+F
Sbjct: 284 RIIGGTTAAPHDWPWQAQILIHVDK-SWNHRCGGTLIDTEWVVTAAHCVF 332
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +3
Query: 357 CGSSILNNRAVLTAAHCLFG-----VMRVRVGSSFGNS---GGRVHQVSRYITHPNY 503
CG S+++ V+TAAHC+ G +V G NS + H V R ITHP Y
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTY 149
Score = 31.1 bits (67), Expect = 0.98
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG----VMRVR 431
RI GG+ +P A L ++ G + CG S+++ + VLTA HC+ + +R
Sbjct: 663 RIVGGTAAKQGDWP-WQAQLRSTSGFPF---CGGSLIHPQWVLTATHCVSSRRPTDLNIR 718
Query: 432 VGSSFGNSGGRVHQ---VSRYITHPNY 503
+G+ + + Q V + I HP Y
Sbjct: 719 LGAHNRRANLGMEQDIKVEKIIMHPGY 745
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 258 QQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF 413
++R+ GS V +P L + DG ++ CG ++++ V+TAAHC+F
Sbjct: 41 EKRVVSGSEVEPQSWPWQVHLLQSRDG-SFLHKCGGALIDREWVVTAAHCVF 91
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 NQQRITGGSVVTIDRYP-ELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFGVMRVR 431
+Q R+ G T +P +++ +++ G + CG S++++ VLTAAHC+ G+ R
Sbjct: 34 SQSRVINGVDATAHAWPWQISLRMMSKKGDDY-HFCGGSLIDSEWVLTAAHCVAGIRNPR 92
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 36.3 bits (80), Expect = 0.026
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 204 LEYVNSNVQQSASDCTNNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNR 383
+ V+++ TN + RI GG+ +P +Q CG +++N
Sbjct: 106 IRQVSAHYSPCGESQTNLRARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINRE 165
Query: 384 AVLTAAHCLF 413
VLTAAHC +
Sbjct: 166 WVLTAAHCFY 175
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 35.9 bits (79), Expect = 0.034
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Frame = +3
Query: 246 CTNN-QQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF--- 413
C N RI GG+ +P A L +G + CG ++++ R V+TA+HC+
Sbjct: 241 CGNRYNSRIVGGTTAQRGAWP-WQAMLRYYNGNHF---CGGTLVHPRWVVTASHCVHKLT 296
Query: 414 -GVMRVRVGSSF--GNSGG-RVHQVSRYITHPNY 503
G + VR+G+ + G +G + ++ R HPNY
Sbjct: 297 TGDLYVRMGAHWKDGKTGSEQDFRIQRIFMHPNY 330
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 410
RI GG+ ++ +P A L ++ G Q+ CG S+++ VLTAAHCL
Sbjct: 259 RIVGGTEAPVNGWP-WQAMLRSAGGSQF---CGGSLIHPEWVLTAAHCL 303
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 620 NQVVWATGWGSMWLRXGHSEQLRHVQLYTVNQNLCRTRH 736
NQ W TGWG++ +L + V+Q+ C T +
Sbjct: 73 NQKCWITGWGTLASGGNQPNKLMQASVPLVSQSKCNTAY 111
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 410
RI GG+ ++ +P A L ++ G Q+ CG S+++ VLTAAHCL
Sbjct: 219 RIVGGTEAPVNGWP-WQAMLRSAGGSQF---CGGSLIHPEWVLTAAHCL 263
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 620 NQVVWATGWGSMWLRXGHSEQLRHVQLYTVNQNLCRTRH 736
NQ W TGWG++ +L + V+Q+ C T +
Sbjct: 417 NQKCWITGWGTLASGGNQPNKLMQASVPLVSQSKCNTAY 455
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 34.7 bits (76), Expect = 0.080
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Frame = +3
Query: 198 KILEYVNSNVQQ-SASDCTNNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSIL 374
K L V +N + SD ++ R+ G T+ +P A +T G CG S++
Sbjct: 40 KSLPLVQTNAEHCGVSDSASS--RVVSGDDATLGEWPWQAWLHVTPHGFV----CGGSLI 93
Query: 375 NNRAVLTAAHCL-------FGVMRVRVGSSFGNSGGRVHQVSRYITHPNY 503
+ VLTA HC+ + V+ V ++ V R I HP+Y
Sbjct: 94 APQWVLTAGHCILTEDPEKYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHY 143
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 410
RI GG ++ +P A G+ CG S++N V+TAAHC+
Sbjct: 432 RIVGGQTAKVEDWPWQAGL---KKGLDDTIVCGGSLINREWVVTAAHCI 477
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 509 VTFESDLAILHVSTQIAYVNNAVRPARI---AGPNYNVADNQVVWATGWGSMWLRXGHSE 679
+ +DLA++ + T I VRP + A P+ V N V TG+G + S
Sbjct: 527 IKLTNDLALIRLRTPITTFTKHVRPVCLPTSATPDLAVGTNCTV--TGYGRVGENEDLST 584
Query: 680 QLRHVQLYTVNQNLCRTRHT 739
QLRH + ++ + CR ++
Sbjct: 585 QLRHATIPVLSVSECRANYS 604
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF----GVMRVR 431
RI GG+ + +P A L ++ G + CG ++++ R V+TA+HC+ +R+R
Sbjct: 23 RIVGGTAAPKNAWP-WQAQLRSASGFPF---CGGTLVHPRFVVTASHCIDKKTPSSLRIR 78
Query: 432 VG----SSFGNSGGRVHQVSRYITHPNY 503
+G + G S + +V R I H Y
Sbjct: 79 LGAHRRAESGESTVQDFRVKRIIKHERY 106
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +3
Query: 357 CGSSILNNRAVLTAAHCLF-----GVMRVRVGSSFGNSGGRVHQVSRYITHPNYV 506
CG S+L++ VLTAAHC+ V VG+ G H++S + H YV
Sbjct: 340 CGGSLLSSTWVLTAAHCVIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYV 394
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +3
Query: 357 CGSSILNNRAVLTAAHCLF-----GVMRVRVGSSFGNSGGRVHQ---VSRYITHPNY 503
CG S++++R V+TAAHC+ G V VG+ V Q +S+ I HP Y
Sbjct: 132 CGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY 188
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG 416
RI GG+ + +P A L T+ G + CG S+++ + +LTA HC+ G
Sbjct: 53 RIVGGTAAKQNSWP-WQAQLRTTSGFPY---CGGSLIHPQWILTATHCVSG 99
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 32.3 bits (70), Expect = 0.42
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +3
Query: 258 QQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFGVMRVRVG 437
++RI GG +P A L+ +G Q+ CG S++N V+TA HC +
Sbjct: 51 RKRIVGGVEAAPGAWPWQVALLM--NGTQF---CGGSLVNENWVVTARHCFHELWSSMDT 105
Query: 438 SSFGNSGGRVHQVS 479
+S+ S G H V+
Sbjct: 106 ASWTASLGEHHLVT 119
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 258 QQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 410
+QRI GG YP LI G CG S+++ + VLTAAHC+
Sbjct: 105 RQRIVGGHDTVKGAYPW--HVLIRKGGHV---ACGGSLISEKWVLTAAHCV 150
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +2
Query: 512 TFESDLAILHVSTQIAYVNNAVRPARIAGPNYNVADNQVVWATGWGSMWLRXGHSEQLRH 691
T + D+A++ + + V + +++ D + TGWG G+S+ LR
Sbjct: 344 TGDYDIALVKLKRPAVFYKR-VHSVCLPEKSWSPPDGAGCYVTGWGRTAENEGYSDVLRE 402
Query: 692 VQLYTVNQNLCRTRHT 739
Q+ V+++ C ++
Sbjct: 403 AQVRLVSRDTCNASYS 418
>SB_20457| Best HMM Match : fn3 (HMM E-Value=5.1e-12)
Length = 1114
Score = 31.1 bits (67), Expect = 0.98
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = +2
Query: 434 WFIIRQQWRQGPSS--EPIHYAP*LRGVTFESDLAILHVSTQIAYVNNAVRPARIAGPNY 607
W+ + QW QG S I+ V + H + +A+V V P I GP
Sbjct: 458 WYRVFMQWTQGDRSMMAEIYAGNRSTCVARREQIPFPHTISVMAFVGEVVPPRPIQGPVM 517
Query: 608 NVADNQVVW 634
N + V W
Sbjct: 518 NALVSYVTW 526
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 31.1 bits (67), Expect = 0.98
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG------VMR 425
RI GG+ +P A L T+ G + CG S++ + +LTA HC+ V+R
Sbjct: 10 RIVGGTAAKHGDWP-WQAQLRTTSGFPY---CGGSLIAPQWILTATHCVERKQASSIVIR 65
Query: 426 VRVGSSFGNSG-GRVHQVSRYITHPNY 503
+ G + + V++ ITHP+Y
Sbjct: 66 LGARRRVATVGTEKDYIVTKVITHPSY 92
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +2
Query: 512 TFESDLAILHVSTQIAYVNNAVRPARIAGPNYNVADNQVVWATGWGSMWLRXGHSEQLRH 691
T + D+A++ + + V + +++ D + TGWG G+S+ LR
Sbjct: 629 TGDYDIALVKLKRPAVFYKR-VHSVCLPEKSWSPPDGAGCYVTGWGRTAENEGYSDVLRE 687
Query: 692 VQLYTVNQNLCRTRHT 739
Q+ V+++ C ++
Sbjct: 688 AQVRLVSRDTCNASYS 703
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +3
Query: 357 CGSSILNNRAVLTAAHCLF-----GVMRVRVGSSFGNSGGRVHQVSRYITHPNYV 506
CG S+L+ +LTAAHC+ V VG+ G H++S + H YV
Sbjct: 56 CGGSLLSPLWLLTAAHCVIRSNNSADYTVIVGAHKRVLDGTEHKLSTFYKHEKYV 110
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +2
Query: 521 SDLAILHVSTQIAYVNNAVRPARIAGPNYNVADNQVVWATGW----GSMWLRXGHSEQLR 688
+D+A++ ++ A +N V A + ++D ++ +ATGW G W S+ L+
Sbjct: 444 NDIALIKLNKP-ARLNKYVNLACLPRQGEELSDGKICYATGWGLTVGGDW--KSQSDVLK 500
Query: 689 HVQLYTVNQNLCRT 730
L VN+ C+T
Sbjct: 501 QTPLPVVNRQECQT 514
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 410
RI GGS +P LI + G Q+ CG +++ V+TAAHC+
Sbjct: 630 RIVGGSTAPPGAWP-WQVMLIYNSGRQF---CGGTLVTPEWVITAAHCV 674
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Frame = +3
Query: 267 ITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFGVMRVRVGSSF 446
I GG+ +P + + S + + CG ++++ VLTAAHC+ + +
Sbjct: 546 IMGGANAEHGEWPWQVSMKLNSSSLPHI--CGGNVISPWWVLTAAHCVQDERASNIKLTM 603
Query: 447 G-----NSGG--RVHQVSRYITHPNY 503
G N G +V V R I+H NY
Sbjct: 604 GEWRLFNVDGTEQVIPVERIISHANY 629
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 524 DLAILHVSTQIAYVNNAVRPARIAGPNYNVADNQVVWATGWGSMWLRXGHSEQLRH-VQL 700
D+A++ +++ + Y N+ VRP + ++ +N + +GWG + GH + H +
Sbjct: 200 DVALIKLASPLQY-NDRVRPVCLPSLKEDLEENTQCYISGWGHL-QEAGHGPWVLHQAAV 257
Query: 701 YTVNQNLCR 727
V+++ C+
Sbjct: 258 PLVSRDTCQ 266
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 243 DCTNNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF 413
D ++ + RI GG +P LAA + CG +++ V+TAAHC +
Sbjct: 716 DSSDKRFRIVGGREAKAGAWPWLAAIYVKGSF-----RCGGALIARDWVVTAAHCFY 767
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 357 CGSSILNNRAVLTAAHCL 410
CG SI+N++ ++TAAHC+
Sbjct: 1809 CGGSIVNSQWIVTAAHCV 1826
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 264 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 410
RI GG+ +P A L+ + + Q CG ++++ V+TA+HC+
Sbjct: 210 RIVGGNDAMHGEWP-WQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCI 257
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 258 QQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHC 407
++RI GG +P AA + +G CG S++ ++ V+TAAHC
Sbjct: 24 KRRIVGGIESANGAWPWQAALFL--NGTH--HRCGGSVIKSQWVVTAAHC 69
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 261 QRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHC 407
+R+ GG ++P A L Q CG ++++ R V+T AHC
Sbjct: 27 RRVVGGDEAKAGQFPWQIALLFKRQ-----QYCGGALVHERWVVTGAHC 70
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +2
Query: 524 DLAILHVSTQIAYVNNAVRPARIAGPNYNVADNQVVWATGWGSMWLRXGHSEQLRHVQLY 703
D+A++ + + + N V+P I PN + N + +GWG L V +
Sbjct: 128 DIALIELDRPVVF-NFHVQPICIMRPNISFKWNTACFISGWGHTRWNGSQPNVLNFVMVP 186
Query: 704 TVNQNLC 724
V+ C
Sbjct: 187 LVSHATC 193
>SB_12798| Best HMM Match : Ammonium_transp (HMM E-Value=0)
Length = 492
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 411 FGVMRVRVGSSFGNSGGRVHQVSRYITHPN 500
+G + GS+FG SGG+ S YI H N
Sbjct: 226 WGWLGFNCGSTFGISGGKWKLASSYIAHAN 255
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 354 GCGSSILNNRAVLTAAHCL 410
GC ++++ R VLTAAHCL
Sbjct: 167 GCTGTLVSPRHVLTAAHCL 185
>SB_21704| Best HMM Match : Ammonium_transp (HMM E-Value=0)
Length = 492
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 411 FGVMRVRVGSSFGNSGGRVHQVSRYITHPN 500
+G + GS+FG SGG+ S YI H N
Sbjct: 226 WGWLGFNCGSTFGISGGKWKLASSYIAHAN 255
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 249 TNNQQ-RITGGSVVTIDRYP-ELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 410
TN+++ RI GGS YP ++A T CG +++ VLTAAHC+
Sbjct: 1154 TNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCV 1209
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 509 VTFESDLAILHVSTQIAYVNNAVRPARIAGPNYNVADNQVVWATGWGSMWLRXGHSEQLR 688
VT D+A+L + A VNN V + +D W TGWG + + L+
Sbjct: 200 VTLAHDIALLKLEKS-ATVNNNVHTVCLPFNGPAPSDCTHCWITGWGHLASGGDTPDLLQ 258
Query: 689 HVQLYTVNQNLC 724
+ V+++ C
Sbjct: 259 QASVPIVSRSRC 270
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 312 AATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 410
A T S V+ GC ++++ + VLT+AHC+
Sbjct: 153 AHTFPFSASVKLSTGCSGTLISRQHVLTSAHCV 185
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 357 CGSSILNNRAVLTAAHCLFGVMR-----VRVGSSFGNSG 458
C +++ R V+TAAHC ++R VR+G+ SG
Sbjct: 1114 CSGVLISARHVITAAHCFDRIIRTDQIIVRLGAYIARSG 1152
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 27.9 bits (59), Expect = 9.1
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +3
Query: 348 VQGCGSSILNNRAVLTAAHCL 410
+ CG ++++++ V+TAAHC+
Sbjct: 499 LHSCGGALISSKWVITAAHCV 519
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,191,234
Number of Sequences: 59808
Number of extensions: 518960
Number of successful extensions: 1176
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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