Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0609
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    37   0.017
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    33   0.16 
Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical pr...    31   0.86 
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    29   3.5  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
 Frame = +3

Query: 204 LEYVNSNVQQSASDCTNNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNR 383
           +E   +   Q  +D      R+ GGS  +   +P     L++  G      CG S+++  
Sbjct: 37  VELAQTRSAQEPADYVTLDHRLIGGSESSPHSWP-WTVQLLSRLGHH---RCGGSLIDPN 92

Query: 384 AVLTAAHCLFGVMR-----VRVGSSFGNSGGRVHQVSRYITHPNY 503
            VLTAAHC     R     VRVG     SG   H+V+    HP Y
Sbjct: 93  FVLTAAHCFAKDRRPTSYSVRVGGHRSGSGS-PHRVTAVSIHPWY 136


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 21/81 (25%), Positives = 39/81 (48%)
 Frame = +2

Query: 482 IHYAP*LRGVTFESDLAILHVSTQIAYVNNAVRPARIAGPNYNVADNQVVWATGWGSMWL 661
           IH+ P  + + F  D+AIL +       N   +P  +   ++     +    +GWGSM L
Sbjct: 104 IHFYPLYKDI-FSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGL 162

Query: 662 RXGHSEQLRHVQLYTVNQNLC 724
           R  ++E+L+   +  +N+  C
Sbjct: 163 R--YAERLQAALIPIINRFDC 181



 Score = 31.1 bits (67), Expect = 0.86
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = +3

Query: 204 LEYVNSNVQQSASDCTNNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNR 383
           L YV  N + +A    +   R+ GG       +P  AA     +       CG+SIL+  
Sbjct: 9   LRYVEVNARDAAK---SRIARVVGGFETVPGAFPWTAAL---RNKATKAHHCGASILDKT 62

Query: 384 AVLTAAHC 407
            ++TAAHC
Sbjct: 63  HLITAAHC 70


>Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical
           protein D1046.4 protein.
          Length = 583

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -2

Query: 172 SQTFLA-PALHYFLNIFFQLLTVFFYYSCRQTSIR 71
           S+TF+  P + YF +IF  ++T  F+Y  ++T IR
Sbjct: 231 SKTFVGWPVIFYFQSIFSCIVTTVFFYFYKETPIR 265


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
 Frame = +3

Query: 228 QQSASDCTNN-QQRITGGSVVTIDRYPELAATLITSDGVQ-----WVQGCGSSILNNRAV 389
           ++   DC  N + +I  G    ID  P  A  + T   V+     W + C  ++ + R +
Sbjct: 27  EKRLEDCGKNVKSKIFNGRKAEIDEAP-WAVRINTYTNVKNIDETWSKHCSGTLTSPRHI 85

Query: 390 LTAAHC 407
           LTA HC
Sbjct: 86  LTATHC 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,659,287
Number of Sequences: 27780
Number of extensions: 379979
Number of successful extensions: 942
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)