Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0609
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    41   1e-05
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.18 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.2  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 41.1 bits (92), Expect = 1e-05
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
 Frame = +3

Query: 255 NQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG----VM 422
           N  RI GG+   I+ +P +A    T +       CG++I++ R VLTAAHC+       +
Sbjct: 157 NPSRIVGGTNTGINEFPMMAGIKRTYEPGMI---CGATIISKRYVLTAAHCIIDENTTKL 213

Query: 423 RVRVG----SSFGNSGGRV-HQVSRYITHPNY 503
            + VG    SS   +   V H +++ I HP Y
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKY 245


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 200 NSRICKFKCATKCFRLYQQSAANYWRLGCDHRPVSRTCCHA 322
           NS I    C  KC R ++   A+  ++  +H  + R  CH+
Sbjct: 98  NSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAACHS 138


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = -2

Query: 163 FLAPALHYFLNIFFQLLTVFFYYSCRQTS 77
           F+ P++H+      + + V++Y+  ++TS
Sbjct: 456 FICPSIHFAQLFADRGMKVYYYFFTQRTS 484


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = -2

Query: 163 FLAPALHYFLNIFFQLLTVFFYYSCRQTS 77
           F+ P++H+      + + V++Y+  ++TS
Sbjct: 456 FICPSIHFAQLFADRGMKVYYYFFTQRTS 484


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,495
Number of Sequences: 438
Number of extensions: 4251
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)