Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0607
(767 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127; Eukar... 93 5e-18
UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20; Eukary... 83 7e-15
UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34; Euka... 79 1e-13
UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15; Eukary... 73 6e-12
UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6; Eukaryo... 71 4e-11
UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=... 59 1e-07
UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillar... 58 2e-07
UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137, w... 58 2e-07
UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia ... 56 7e-07
UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropy... 47 4e-04
UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1; Archae... 45 0.002
UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n... 42 0.013
UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1; Encepha... 42 0.017
UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6; Archae... 40 0.051
UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum ae... 40 0.068
UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3; Pyroco... 40 0.090
UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1; uncult... 39 0.16
UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 38 0.21
UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 38 0.27
UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4; Thermo... 38 0.27
UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8; Archae... 38 0.27
UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 38 0.36
UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4; Euryar... 36 0.84
UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 36 1.5
UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2; Lact... 35 1.9
UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 35 1.9
UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43; Lac... 35 2.6
UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 35 2.6
UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4; Methan... 35 2.6
UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 34 4.5
UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n... 34 4.5
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 33 5.9
UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1; Kineo... 33 7.8
>UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127;
Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens
(Human)
Length = 115
Score = 93.5 bits (222), Expect = 5e-18
Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = +3
Query: 90 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLGEATE 269
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P L +E
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPAL-RKSE 59
Query: 270 K*SFPILVK-GMHMESY*QRSMDSLCG 347
+ +L K G+H S + + CG
Sbjct: 60 IEYYAMLAKTGVHHYSGNNIELGTACG 86
>UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20;
Eukaryota|Rep: 60S ribosomal protein L30 - Branchiostoma
belcheri (Amphioxus)
Length = 114
Score = 83.0 bits (196), Expect = 7e-15
Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +3
Query: 102 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLGEATEK*SF 281
K+++KT+ESINSRL LVMKSGKY LG K+TLK LRQGKAKL+IIA N P L +E +
Sbjct: 2 KQKRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPAL-RKSEIEYY 60
Query: 282 PILVK-GMHMESY*QRSMDSLCG 347
+L K G+H S + + CG
Sbjct: 61 AMLAKTGVHHYSGNNIELGTACG 83
>UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34;
Eukaryota|Rep: 60S ribosomal protein L30-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 112
Score = 79.0 bits (186), Expect = 1e-13
Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +3
Query: 90 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLGEATE 269
MV KK KK+ E INSRLALVMKSGKY LGYK LK+LR K KL++I+ N PPL +E
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPL-RRSE 59
Query: 270 K*SFPILVK-GMHMESY*QRSMDSLCG 347
+ +L K G+H + + + CG
Sbjct: 60 IEYYAMLAKVGVHHYNGNNVDLGTACG 86
>UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15;
Eukaryota|Rep: 60S ribosomal protein L30 - Trypanosoma
brucei brucei
Length = 105
Score = 73.3 bits (172), Expect = 6e-12
Identities = 32/55 (58%), Positives = 46/55 (83%)
Frame = +3
Query: 99 AKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLGEA 263
AKK K +++IN+++ LVMKSGKY LG +Q+LKTLRQG++KLV+I+ N PP+ +A
Sbjct: 2 AKKVKSKVDTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKA 56
>UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6;
Eukaryota|Rep: 60S ribosomal protein L30 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 105
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +3
Query: 114 KTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
K+ ESIN +LALV+KSGKY LGYK T+K+LRQGK+KL+IIA N P L
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVL 51
>UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=5;
Eukaryota|Rep: 60S ribosomal protein L30, putative -
Trichomonas vaginalis G3
Length = 112
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +3
Query: 102 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
KK + ESI + L+LV KSGKY LG QTLK+LR G+AKLVI A N P
Sbjct: 4 KKLSRARESIINSLSLVTKSGKYSLGISQTLKSLRNGEAKLVIFASNVAP 53
>UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillardia
theta|Rep: 60S ribosomal protein L30 - Guillardia theta
(Cryptomonas phi)
Length = 107
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 105 KQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
K K T E ++S+L +++K+GK+ GYK TLK LR GK K++II N PL
Sbjct: 5 KNKSTSELLSSKLKIIIKTGKFSYGYKATLKNLRSGKCKMIIITDNCIPL 54
>UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137,
whole genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_137,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 201
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +3
Query: 123 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
ES+N +L LV++SGK +GYKQTLK +R G AKLV I+ N P +
Sbjct: 8 ESVNQKLQLVVRSGKITMGYKQTLKAIRNGTAKLVFISNNCPTI 51
>UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_24_9208_8879 - Giardia lamblia ATCC
50803
Length = 109
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3
Query: 111 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPL 254
KK +SI+ L LV+KSGKY LG Q ++ +R GKA+LV +A N PPL
Sbjct: 8 KKAQDSISLTLTLVVKSGKYTLGTDQAIRNIRDGKAQLVFMANNCPPL 55
>UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L30e - Aeropyrum
pernix
Length = 100
Score = 47.2 bits (107), Expect = 4e-04
Identities = 18/42 (42%), Positives = 31/42 (73%)
Frame = +3
Query: 126 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
S+ L ++K+G Y +G+KQ+LK ++ G+AK ++IA+N PP
Sbjct: 2 SVEKALKDLVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPP 43
>UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L30e -
Archaeoglobus fulgidus
Length = 86
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
+ + + V+K+G Y LG K TLK+LR G+AK VI+A N P
Sbjct: 4 VETIIKTVLKTGGYRLGSKSTLKSLRNGEAKAVIVASNCP 43
>UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 170
Score = 42.3 bits (95), Expect = 0.013
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 235 AMITSFALPCRRVFKVCLYPKQYFPDFITKARRELIDSMVFF--CFFAATIL 86
A+ T+ P R+VF V LYP Y PD +T REL+ S FF CF A L
Sbjct: 114 AINTNLLAPLRKVFSVDLYPSVYRPDRMTIVSRELMPSAAFFEPCFGAIFFL 165
>UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L30
- Encephalitozoon cuniculi
Length = 108
Score = 41.9 bits (94), Expect = 0.017
Identities = 16/42 (38%), Positives = 30/42 (71%)
Frame = +3
Query: 123 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
+++ S L L M++GKY +G+K+ +K++ KAK ++I+ N P
Sbjct: 9 DNVTSSLLLAMRTGKYIVGFKRAIKSVIMKKAKCLVISSNFP 50
>UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6;
Archaea|Rep: 50S ribosomal protein L30e - Methanopyrus
kandleri
Length = 109
Score = 40.3 bits (90), Expect = 0.051
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3
Query: 120 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
++ I ++ + +++G LG QT+K L+ GK KLVI+A N P
Sbjct: 1 MQEIERQIRMAVETGDVVLGSNQTIKLLKLGKPKLVIVAANCP 43
>UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum
aestivum|Rep: Ribosomal protein L30 - Triticum aestivum
(Wheat)
Length = 75
Score = 39.9 bits (89), Expect = 0.068
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +3
Query: 108 QKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLGE 260
+++ +IN++L LVMKSGKY LGYK LK + + ++ K P E
Sbjct: 24 RRRARRNINNKLQLVMKSGKYTLGYKTVLKDAPELQGEVDYPRKQLPSAQE 74
>UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3;
Pyrococcus|Rep: 50S ribosomal protein L30e - Pyrococcus
furiosus
Length = 99
Score = 39.5 bits (88), Expect = 0.090
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 141 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
L M++GK LG +T++ + G AKL+I+AKNAP
Sbjct: 7 LRKAMETGKVVLGSNETIRLAKTGGAKLIIVAKNAP 42
>UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L30E - Uncultured methanogenic archaeon RC-I
Length = 101
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
++ L V+++GK +G KQ +K ++G AKLVI+A N P
Sbjct: 5 LDKSLRSVVRTGKVLIGTKQAVKASQRGVAKLVIVATNCP 44
>UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanospirillum hungatei JF-1|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 95
Score = 38.3 bits (85), Expect = 0.21
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 132 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
N+ L +K+GK LG +T ++ +G AKLV++A N P
Sbjct: 4 NTSLRRAIKTGKVILGQNETKDSIEKGSAKLVVVAANCP 42
>UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 96
Score = 37.9 bits (84), Expect = 0.27
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 132 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
N L MK+G+ LG K + + KA+LVIIAKNAP
Sbjct: 4 NLSLRRAMKTGEVTLGQNSVEKIVAENKAELVIIAKNAP 42
>UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4;
Thermoproteaceae|Rep: 50S ribosomal protein L30e -
Pyrobaculum aerophilum
Length = 102
Score = 37.9 bits (84), Expect = 0.27
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
I+ L + + +GK +G+++T K L G KL+I+A NAP
Sbjct: 4 ISRELQVAINTGKVVIGFEETKKALLTGAPKLIILAANAP 43
>UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8;
Archaea|Rep: 50S ribosomal protein L30e - Methanococcus
jannaschii
Length = 110
Score = 37.9 bits (84), Expect = 0.27
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
+N + + +GK LG K+T+K ++ G+ KLV++A N P
Sbjct: 9 VNKAIRTAVDTGKVILGSKRTIKFVKHGEGKLVVLAGNIP 48
>UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanoregula boonei
(strain 6A8)
Length = 97
Score = 37.5 bits (83), Expect = 0.36
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 132 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
N+ L +K+G LG T K +++GKA++V+IA N P
Sbjct: 4 NASLRRAIKTGDVILGQNNTEKCIKEGKAQMVVIAANCP 42
>UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L30e -
Methanobacterium thermoautotrophicum
Length = 98
Score = 36.3 bits (80), Expect = 0.84
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
I+ + + + +G LG K+T+++L+ GK KLV++A N P
Sbjct: 3 IDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIP 42
>UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Pyrobaculum arsenaticum DSM 13514|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321)
Length = 104
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 248
I L + + +G +G+++T + L G KLVIIA NAP
Sbjct: 7 IGRELQVAINTGSVVIGFEETRRALLAGTPKLVIIAANAP 46
>UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2;
Lactobacillales|Rep: Ribosomal protein L7A family -
Enterococcus faecalis (Streptococcus faecalis)
Length = 101
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 141 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
L L M++GK G + TLK +R KAK V +A++A
Sbjct: 11 LGLAMRAGKLVTGEELTLKDIRANKAKFVFVAQDA 45
>UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=2; Desulfitobacterium hafniense|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Desulfitobacterium hafniense
(strain DCB-2)
Length = 98
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 120 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP----PLGEATEK*SFPI 287
+E I S L L ++GK G Q L++GK L+I+A++AP G+ E P+
Sbjct: 2 LERIYSLLGLARRAGKITSGESQIEVMLKKGKGFLLILAEDAPGTHKKYGKWAEDLRLPV 61
Query: 288 LVKG 299
L+ G
Sbjct: 62 LILG 65
>UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43;
Lactobacillales|Rep: Ribosomal protein L7A family -
Streptococcus pneumoniae
Length = 99
Score = 34.7 bits (76), Expect = 2.6
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +3
Query: 123 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
+ I++ L L ++G+ G + +K ++ GKAKLV +A +A P
Sbjct: 4 QKISNLLGLAQRAGRIISGEELVVKAIQDGKAKLVFLAHDAGP 46
>UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 117
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 129 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
I S L L K+ K GY+ + L+ GKA+LVI+A++A
Sbjct: 6 IYSFLGLARKANKLAAGYESCERLLKAGKAELVIVAEDA 44
>UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L30e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 103
Score = 34.7 bits (76), Expect = 2.6
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 126 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP-PLGEATEK*SFPIL 290
+++ L +K+GK +G +T+ G AK+V++A N P + + ++ + P+L
Sbjct: 11 NVDKSLIKAVKTGKVIIGANRTVDAAENGSAKMVVLASNCPADIKKKVQETNVPVL 66
>UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Moorella thermoacetica ATCC 39073|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Moorella thermoacetica
(strain ATCC 39073)
Length = 102
Score = 33.9 bits (74), Expect = 4.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 120 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 251
+ +I S L L ++GK GY+ + LR K +LV++A++ P
Sbjct: 1 MNNIYSLLGLAYRAGKIVWGYQAVVAALRSQKVELVLLARDGSP 44
>UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n=1;
Clostridium difficile 630|Rep: Putative ribosomal
protein precursor - Clostridium difficile (strain 630)
Length = 103
Score = 33.9 bits (74), Expect = 4.5
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 111 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
K E + S L L ++GK G TL L++GK L++IA++A
Sbjct: 2 KNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDA 46
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 33.5 bits (73), Expect = 5.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 159 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 242
+GKYC G + TLK L G +++I+ +N
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYEN 325
>UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1;
Kineococcus radiotolerans SRS30216|Rep: Type III
secretion exporter - Kineococcus radiotolerans SRS30216
Length = 360
Score = 33.1 bits (72), Expect = 7.8
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 120 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 245
I ++ L L++ +G Y + Y++T+K LR K + + KNA
Sbjct: 187 IVAVTVLLGLIIAAGDYAMSYRRTMKKLRMSKQDIKMEHKNA 228
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,471,114
Number of Sequences: 1657284
Number of extensions: 13151818
Number of successful extensions: 28026
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 27267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28024
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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