Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0606
(369 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369... 69 9e-13
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847... 69 9e-13
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86... 61 2e-10
03_06_0582 - 34891613-34891795,34892407-34892466,34893134-348932... 46 7e-06
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 42 2e-04
02_05_0421 + 28827856-28828009,28828453-28828529,28828642-288286... 33 0.053
01_01_0689 - 5287110-5287209,5287444-5287691,5287935-5288107,528... 29 0.86
01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841 29 1.5
11_06_0715 + 26552962-26553510,26553578-26555746 28 2.0
07_01_0703 - 5295561-5297523,5299344-5299462 28 2.0
04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455 28 2.0
01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 28 2.0
09_06_0195 - 21477817-21478119,21478216-21478366,21478459-214786... 28 2.6
06_02_0079 - 11512747-11512770,11513281-11513321,11513409-115135... 28 2.6
08_02_0818 - 21524539-21524664,21524911-21524961,21525800-215261... 27 4.6
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 27 4.6
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900... 27 4.6
05_04_0260 + 19501643-19503010 27 6.1
05_04_0257 + 19487757-19489070 27 6.1
03_06_0051 + 31290431-31290610,31290727-31290849,31291771-312919... 27 6.1
03_05_0807 + 27849637-27849823,27850002-27850294,27850736-278509... 27 6.1
03_02_0332 + 7559469-7560892,7563193-7563298,7563403-7563491,756... 27 6.1
03_01_0463 + 3551764-3551897,3551989-3552046,3552148-3552255,355... 27 6.1
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353... 27 6.1
09_04_0689 - 19480409-19480599,19480780-19480889,19481032-194811... 26 8.1
02_05_0753 + 31510269-31510473,31510989-31511035,31511123-315111... 26 8.1
01_03_0003 + 11509530-11512772 26 8.1
>08_01_0417 -
3692247-3692329,3692442-3692504,3693233-3693350,
3694084-3694095
Length = 91
Score = 69.3 bits (162), Expect = 9e-13
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +2
Query: 32 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 205
M L E F+Q A+K + S++ L LY LYKQAT+GDVN A+P + AKW AW
Sbjct: 1 MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTARPGIFAQRDRAKWDAW 60
Query: 206 NGRKGISQDDAKKQYI 253
+G S+++A YI
Sbjct: 61 KAVEGKSKEEAMSDYI 76
>03_05_0107 -
20883353-20883627,20883739-20883801,20884608-20884725,
20885012-20885023
Length = 155
Score = 69.3 bits (162), Expect = 9e-13
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +2
Query: 32 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 205
M L E F++ A+KV+ S+++ L LY LYKQAT+GDVN ++P + AKW AW
Sbjct: 1 MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTSRPGIFAQRDRAKWDAW 60
Query: 206 NGRKGISQDDAKKQYI 253
+G S+++A YI
Sbjct: 61 KAVEGKSKEEAMSDYI 76
>06_01_0108 -
860080-860162,860276-860338,860857-860974,861481-861492
Length = 91
Score = 61.3 bits (142), Expect = 2e-10
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +2
Query: 32 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAW 205
M L E+F++ A+K + S+++ L LY LYKQAT+G V +P L + KW AW
Sbjct: 1 MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVTTGRPGIFNLKDRYKWDAW 60
Query: 206 NGRKGISQDDAKKQYI 253
+G S+++A YI
Sbjct: 61 KAVEGKSKEEAMADYI 76
>03_06_0582 -
34891613-34891795,34892407-34892466,34893134-34893280,
34893502-34893657,34893745-34893828,34893907-34893995,
34894575-34894689,34894776-34894899,34895080-34895219,
34895868-34895929,34896042-34896108,34896185-34896295,
34896868-34896945,34897074-34897274,34897492-34897563,
34897630-34897693,34898084-34898154,34898328-34898474
Length = 656
Score = 46.4 bits (105), Expect = 7e-06
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +2
Query: 98 DDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQYIEMRRNS 271
+D L LY LY+QAT+G N+ +P VE +KW +W+G + +A + ++++
Sbjct: 37 NDVALLLYGLYQQATVGPCNVPKPRAWNPVEQSKWTSWHGLGSMPSAEAMRLFVKILEEE 96
Query: 272 TP 277
P
Sbjct: 97 DP 98
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 86 TKPSDDENLALYSLYKQATIGDVNIAQPSG--LVESAKWKAWNGRKGISQDDAKKQYIEM 259
T + L LY LYK AT G QPS L AKW AW+ + ++A ++YI +
Sbjct: 109 TSVPEQAQLQLYGLYKIATEGPCTAPQPSALKLKARAKWNAWHKLGAMPTEEAMQKYITV 168
Query: 260 RRNSTPN 280
PN
Sbjct: 169 VDELFPN 175
>02_05_0421 +
28827856-28828009,28828453-28828529,28828642-28828699,
28828834-28828909,28829659-28829728,28829828-28830247
Length = 284
Score = 33.5 bits (73), Expect = 0.053
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 183 RAPSGRHG-TVAKASPKTMPRSNTSKCGETPLQIRINYYLELNK 311
R HG + A A+P T+P + + GETPL + Y +E+ +
Sbjct: 95 RGAFAAHGISFASAAPPTIPSAENNNAGETPLADALRYQIEVQR 138
>01_01_0689 - 5287110-5287209,5287444-5287691,5287935-5288107,
5288913-5289060,5289537-5289696,5290021-5290166,
5290963-5291191,5291901-5292123,5292253-5292401,
5293501-5293670,5294188-5294259,5294363-5294443,
5296180-5296311,5296381-5296468,5296841-5297054,
5297501-5297684,5298069-5298152,5299002-5299131,
5299280-5299650,5299684-5299967,5300932-5301247
Length = 1233
Score = 29.5 bits (63), Expect = 0.86
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 293 IIYAYLEWSFSAFRCIASWHRLGRCLC 213
I+Y WS A RC +W GR LC
Sbjct: 1146 IVYEKARWSNDASRCGFAWKVAGRALC 1172
>01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841
Length = 534
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -1
Query: 216 LRPFHAFHLALSTRPLGWAMLTSPMVACLYREYSARFSSSLGLVFQFLTLSATCLNCSSR 37
LR + +A+ R L + + SP++ CL YS R L L L C+ C +
Sbjct: 230 LRELGLYCVAMEDRDLDFVLANSPVLECLGIYYSQRQIVLLRLASHSLRCVQICM-CIAE 288
Query: 36 DI 31
DI
Sbjct: 289 DI 290
>11_06_0715 + 26552962-26553510,26553578-26555746
Length = 905
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 133 LVQGVQRKVLIVTGLGLP---VPNLIGDLFEL 47
LV G R + ++ +GLP +PN+IGDLF L
Sbjct: 560 LVAGKCRYMSVLELIGLPKDNIPNVIGDLFNL 591
>07_01_0703 - 5295561-5297523,5299344-5299462
Length = 693
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 129 YREYSARFSSSLGLVFQFLTLSAT--CLNCSSRDILCYLLRSGGR 1
+RE A+ + +G + Q L+ C NCS +L L +S GR
Sbjct: 454 FREDDAQLAEEIGDLVQLRVLNVVLNCSNCSEAKVLTELAKSMGR 498
>04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455
Length = 300
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 3 YLLISKDNT-KCLSTSNSNRSPIRLGTGRPSP 95
+L+IS NT K L++ S+ SP +LG G P P
Sbjct: 124 FLIISLRNTNKGLTSLQSSSSPTKLGDGLPLP 155
>01_06_1208 +
35424241-35424370,35424415-35424728,35424782-35424967,
35425361-35425523,35425601-35425787,35425875-35426016
Length = 373
Score = 28.3 bits (60), Expect = 2.0
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +3
Query: 45 SNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKAS 224
+ S+RSP+ T +RL + L PA + A G HG AS
Sbjct: 52 AGSSRSPVFSSLVEDDGETRHLQALDGADTRLRLFQMDLLDPASITPAVDGAHGVFHLAS 111
Query: 225 PKTMPRSNTSKCGETPL---QIRINYYL 299
P T+ + + +P Q+++ Y L
Sbjct: 112 PLTLHPTQDPEATNSPFTIAQLQLQYCL 139
>09_06_0195 -
21477817-21478119,21478216-21478366,21478459-21478696,
21478786-21478996,21479162-21479361,21479453-21479545,
21479722-21481093
Length = 855
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 278 LEWSFSAFRCIASWHRLGRCLC 213
++WS SAF CIA++ L LC
Sbjct: 1 MDWSSSAFTCIAAFLLLSPALC 22
>06_02_0079 -
11512747-11512770,11513281-11513321,11513409-11513505,
11513555-11513965,11514493-11514665,11514829-11516008
Length = 641
Score = 27.9 bits (59), Expect = 2.6
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 38 LDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNI-AQPSGLVESAKWKAWNGR 214
+DE ++ + VR+ +P + L+ L G + + AQ + + + KA R
Sbjct: 358 VDEHYQLLQPIVRSRSLQPLSWHQVQLWKLPPSLHAGSIELSAQHASDLGNLHLKAAQLR 417
Query: 215 KGISQDDAKKQYIEMRRNSTPNTHKLLL 298
+ +++ IEMR S HK LL
Sbjct: 418 RQEHALKRREKMIEMREESVQGLHKSLL 445
>08_02_0818 -
21524539-21524664,21524911-21524961,21525800-21526170,
21526497-21526852,21527926-21527996
Length = 324
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +2
Query: 59 VADKVRNWKTKP----SDDENLALYSLYKQAT 142
V D++ W P +D+EN + +LYK+AT
Sbjct: 241 VKDRIEEWYRPPWDRTADEENASFNALYKEAT 272
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 101 DENLALYSLYKQATIGDVNIAQPSGLVES 187
DE+ AL +L+ A + VNI QPS +VES
Sbjct: 476 DESSALDALHTLADLS-VNILQPSSIVES 503
>01_04_0143 +
16689471-16689498,16689687-16689818,16689974-16690013,
16690214-16690280,16690349-16690431,16690755-16690821,
16692741-16692821,16693696-16693791,16694172-16694198
Length = 206
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 80 WKTKPSDDENLALYSLYKQATIGDVNIAQ 166
WK S ++NLA +++Y T V++ Q
Sbjct: 138 WKVSRSSEQNLAFFAVYNMETTDIVSLYQ 166
>05_04_0260 + 19501643-19503010
Length = 455
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 221 ISQDDAKKQYIEMRRNSTP 277
+S+DDA +QY+ M R TP
Sbjct: 39 VSKDDATQQYVTMFRQRTP 57
>05_04_0257 + 19487757-19489070
Length = 437
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 221 ISQDDAKKQYIEMRRNSTP 277
+S+DDA +QY+ M R TP
Sbjct: 41 VSKDDATQQYVTMFRQRTP 59
>03_06_0051 +
31290431-31290610,31290727-31290849,31291771-31291928,
31292395-31292497,31293077-31293172,31293367-31293432,
31293500-31293619,31293905-31293991
Length = 310
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 65 DKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 202
+K K KP + L YSL TI ++ +++ KW A
Sbjct: 254 EKCIGLKVKPRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVA 299
>03_05_0807 +
27849637-27849823,27850002-27850294,27850736-27850973,
27851075-27851410,27851496-27851581,27851678-27851785,
27851878-27852185,27852265-27852528,27852610-27853381
Length = 863
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 179 VESAKWKAWNGRKGISQDDAKKQYIEMRRNSTPNTHKLLLR 301
+ SA +K WN + DD K+ I ++ S+P+ KLL++
Sbjct: 585 MSSAVYKNWNFTEQGLPDDLIKRGIAIKDPSSPSKVKLLIK 625
>03_02_0332 +
7559469-7560892,7563193-7563298,7563403-7563491,
7563780-7563841,7564247-7564278
Length = 570
Score = 26.6 bits (56), Expect = 6.1
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 86 TKPSDDENLALYSLYKQATIGDV-NIAQPSGLVES--AKWKAWNGRKGISQDDAKKQYIE 256
+K D L L L K A G + QP L S AKW AW + + A ++Y+
Sbjct: 436 SKLDSDVQLQLQGLLKVAIDGPCYDSTQPLTLRPSSRAKWAAWQKLGNMYPETAMERYMN 495
Query: 257 MRRNSTP 277
+ + P
Sbjct: 496 LLSEAIP 502
>03_01_0463 +
3551764-3551897,3551989-3552046,3552148-3552255,
3552664-3552721,3552788-3553014,3553085-3553145,
3553311-3553615
Length = 316
Score = 26.6 bits (56), Expect = 6.1
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +2
Query: 8 PDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVES 187
PD + DE + A++ + KP+ + +SLY AT ++ +++
Sbjct: 192 PDAEARLSQPKDETWSDCAEQ--GFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQG 249
Query: 188 AKWKA 202
KW A
Sbjct: 250 EKWSA 254
>01_07_0064 +
40834649-40834786,40834934-40834997,40835333-40835391,
40835602-40835677,40835775-40835846,40837641-40837728,
40838239-40838497,40838766-40839000,40839447-40839470,
40839910-40839997,40840110-40840300,40841082-40841322,
40841803-40842556
Length = 762
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 2 LPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 178
L P + K D FK+ D+V +W T D+ N+A Y + + P G+
Sbjct: 161 LSPRILEDFKAYADVCFKEFGDRVAHWIT--IDEPNVASIGSYDSGQLAPGRCSDPFGI 217
>09_04_0689 -
19480409-19480599,19480780-19480889,19481032-19481117,
19481410-19481523,19481697-19482066,19482216-19482346,
19482628-19482736,19482901-19483022,19483113-19483219,
19483447-19483551,19483654-19483812,19484071-19484126,
19484200-19484251,19486724-19486821,19487086-19487210
Length = 644
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 79 VPNLIGDLFELLVERHFVLSF 17
VP G+ ++LL E+HFVL +
Sbjct: 447 VPVTAGNFYKLLAEKHFVLLY 467
>02_05_0753 +
31510269-31510473,31510989-31511035,31511123-31511177,
31511282-31511354,31511441-31511528,31511658-31511740,
31511841-31511970,31512183-31512261,31512409-31512473,
31512581-31512682
Length = 308
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 95 SDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKAWNGRKGISQDDAKK 244
SD ALY +A IG + +A+P+ + ++A W G K ++ AKK
Sbjct: 19 SDRRRSALYGGEGRARIGSLRVAEPA-VAKAAVWA--RGSKPVAPLRAKK 65
>01_03_0003 + 11509530-11512772
Length = 1080
Score = 26.2 bits (55), Expect = 8.1
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Frame = +3
Query: 57 RSPIRLGTGRPSPV--TMRTLRCTPCTSRLP*VMLTLPSPAVLWRA-----PSGRHGTVA 215
R P+ G GR S + T R SRLP V L + A W G H
Sbjct: 307 RQPLDHG-GRGSCIVTTTRNQNVAQIMSRLPQVNLDGLNLAASWALFCHCIRQGCHSLKL 365
Query: 216 KASPKTMPRSNTSKCGETPLQIRI 287
+ +T+ R KC PL IR+
Sbjct: 366 SGTLETIGRGIVEKCSGVPLTIRV 389
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,002,517
Number of Sequences: 37544
Number of extensions: 248421
Number of successful extensions: 869
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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