Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0605
(797 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 129 7e-29
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 117 3e-25
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 114 3e-24
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 113 5e-24
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 113 6e-24
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 113 6e-24
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 107 2e-22
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 105 1e-21
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 101 3e-20
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 100 8e-20
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 99 1e-19
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 98 3e-19
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 97 6e-19
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 95 1e-18
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 95 1e-18
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 95 2e-18
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 95 2e-18
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 94 4e-18
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 94 4e-18
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 94 4e-18
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 92 2e-17
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 89 2e-16
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 88 2e-16
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 87 4e-16
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 87 4e-16
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 87 4e-16
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 84 3e-15
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 84 4e-15
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 82 2e-14
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 79 2e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 79 2e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 78 3e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 75 2e-12
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 75 2e-12
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 75 2e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 74 4e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 74 5e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 5e-12
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 73 6e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 73 6e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 73 6e-12
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 73 8e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 73 1e-11
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 72 1e-11
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 72 1e-11
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 72 1e-11
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 72 1e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 71 4e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 71 4e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 70 8e-11
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 69 1e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 69 1e-10
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 68 2e-10
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 68 3e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 68 3e-10
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 67 4e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 67 4e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 66 7e-10
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 66 7e-10
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 66 1e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 65 2e-09
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 64 4e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 64 4e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 63 7e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 63 9e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 62 1e-08
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 62 1e-08
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 62 2e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 62 2e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 62 2e-08
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 62 2e-08
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 62 2e-08
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 62 2e-08
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 62 2e-08
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 61 4e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 60 6e-08
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 60 6e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 60 6e-08
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 60 6e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 60 8e-08
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 59 1e-07
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 59 1e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 58 2e-07
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 57 4e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 57 4e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 57 6e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 57 6e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 56 8e-07
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 53 7e-06
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 53 7e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 53 1e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 51 3e-05
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 51 3e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 49 2e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 48 2e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 46 8e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 45 0.003
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 43 0.008
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 43 0.008
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 43 0.010
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.67
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.6
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 36 1.6
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.7
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.7
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 4.8
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 129 bits (312), Expect = 7e-29
Identities = 57/80 (71%), Positives = 61/80 (76%)
Frame = +3
Query: 525 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 704
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 705 NLCYTSNWVIRIYCLSSSYI 764
NLCY SNW+I IYCLSSSYI
Sbjct: 67 NLCYISNWIISIYCLSSSYI 86
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 117 bits (282), Expect = 3e-25
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL DRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKKET
Sbjct: 192 MLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKET 251
Query: 688 F 690
F
Sbjct: 252 F 252
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 186 IRF 194
+ F
Sbjct: 84 MSF 86
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/84 (44%), Positives = 42/84 (50%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLS + H G SVDL IFSLHLAG SS + D++ L
Sbjct: 108 TGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSL 167
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
F +V ITA AGAIT
Sbjct: 168 FSWSVFITAILLLLSLPVLAGAIT 191
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 114 bits (274), Expect = 3e-24
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE
Sbjct: 208 MLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEP 267
Query: 688 F 690
F
Sbjct: 268 F 268
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = +3
Query: 3 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 183 NIRF 194
N+ F
Sbjct: 99 NMSF 102
Score = 66.1 bits (154), Expect = 1e-09
Identities = 39/84 (46%), Positives = 43/84 (51%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S Q PL
Sbjct: 124 TGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPL 183
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV AV +TA A IT
Sbjct: 184 FVWAVLVTAVLLLLSLPVLAAGIT 207
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 113 bits (272), Expect = 5e-24
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE
Sbjct: 208 MLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEP 267
Query: 688 F 690
F
Sbjct: 268 F 268
Score = 74.1 bits (174), Expect = 4e-12
Identities = 38/84 (45%), Positives = 47/84 (55%)
Frame = +3
Query: 3 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
AELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 183 NIRFXXXXXXXXXXXXXXIVENGA 254
N+ F +VE GA
Sbjct: 99 NMSFWLLPPSLLLLLASAMVEAGA 122
Score = 61.3 bits (142), Expect = 3e-08
Identities = 37/84 (44%), Positives = 42/84 (50%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPL+ N +H G SVDL IFSLHLAG+SS + Q PL
Sbjct: 124 TGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPL 183
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V ITA A IT
Sbjct: 184 FVWSVLITAVLLLLSLPVLAAGIT 207
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 113 bits (271), Expect = 6e-24
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE
Sbjct: 209 MLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEP 268
Query: 688 F 690
F
Sbjct: 269 F 269
Score = 77.4 bits (182), Expect = 4e-13
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = +3
Query: 3 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
AELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 183 NIRFXXXXXXXXXXXXXXIVENGA 254
N+ F VE GA
Sbjct: 100 NMSFWLXPPSFLLLLASSTVEAGA 123
Score = 67.3 bits (157), Expect = 4e-10
Identities = 41/84 (48%), Positives = 44/84 (52%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S Q PL
Sbjct: 125 TGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPL 184
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V ITA A IT
Sbjct: 185 FVWSVLITAVLLLLSLPVLAAGIT 208
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 113 bits (271), Expect = 6e-24
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE
Sbjct: 208 MLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEP 267
Query: 688 F 690
F
Sbjct: 268 F 268
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = +3
Query: 3 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 183 NIRF 194
N+ F
Sbjct: 99 NMSF 102
Score = 63.7 bits (148), Expect = 5e-09
Identities = 37/84 (44%), Positives = 43/84 (51%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPL+ N+AH G SVDL IFSLHLAG+SS + Q PL
Sbjct: 124 TGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPL 183
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V +TA A IT
Sbjct: 184 FVWSVLVTAVLLLLSLPVLAAGIT 207
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 107 bits (258), Expect = 2e-22
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 678
+LL DRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S GK
Sbjct: 211 MLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGK 267
Score = 66.9 bits (156), Expect = 6e-10
Identities = 38/84 (45%), Positives = 46/84 (54%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLS +H G +VDLAIFSLHL+G+SS + +LPL
Sbjct: 127 TGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPL 186
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V +TAF AGAIT
Sbjct: 187 FVWSVLVTAFLLLLSLPVLAGAIT 210
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PG I G+ Q+YN ++TAHA N VP+++GAPD+AFPR+
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F +VE G+
Sbjct: 101 NNISFWLLPPSLLLLLSSALVEVGS 125
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 105 bits (252), Expect = 1e-21
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 678
+LL DRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S GK
Sbjct: 208 MLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSGK 264
Score = 66.5 bits (155), Expect = 7e-10
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLS +H G SVDLAIFSLHL+GISS + +LPL
Sbjct: 124 TGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPL 183
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV A+ +TA AGAIT
Sbjct: 184 FVWAIFVTAILLLLSLPVLAGAIT 207
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F VE GA
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGA 122
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 101 bits (241), Expect = 3e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+LL DRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S
Sbjct: 216 MLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS 267
Score = 64.5 bits (150), Expect = 3e-09
Identities = 37/84 (44%), Positives = 46/84 (54%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLSS +H G +VDLAIFSLH++G SS S ++PL
Sbjct: 132 TGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPL 191
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV ++ +TAF AGAIT
Sbjct: 192 FVWSILVTAFLLLLAVPVLAGAIT 215
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL P + L+G+ QIYN ++TAHA N LVP+++G+PD+AFPR+
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 180 NNIRF 194
NNI F
Sbjct: 106 NNISF 110
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 99.5 bits (237), Expect = 8e-20
Identities = 44/61 (72%), Positives = 52/61 (85%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL+DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPV 267
Query: 688 F 690
F
Sbjct: 268 F 268
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/84 (44%), Positives = 43/84 (51%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLSS AH G SVDLAIF+LHL ISS + +LPL
Sbjct: 125 TGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPL 184
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV ++ ITAF + IT
Sbjct: 185 FVWSIFITAFLLLLSLPVLSAGIT 208
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F +VE+GA
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGA 123
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 99.1 bits (236), Expect = 1e-19
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ KK
Sbjct: 212 LLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRV 270
Query: 688 F 690
F
Sbjct: 271 F 271
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/84 (42%), Positives = 40/84 (47%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLSS +H G SVDL IFS HL GI S LPL
Sbjct: 128 TGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPL 187
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V +T+F A AIT
Sbjct: 188 FVWSVAVTSFLVIVAIPVLAAAIT 211
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 180 NNIRF 194
NN F
Sbjct: 102 NNFSF 106
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 97.9 bits (233), Expect = 3e-19
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL+DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK
Sbjct: 209 MLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPV 267
Query: 688 F 690
F
Sbjct: 268 F 268
Score = 64.5 bits (150), Expect = 3e-09
Identities = 39/84 (46%), Positives = 43/84 (51%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLSS AH G SVDLAIFSLHL ISS S ++PL
Sbjct: 125 TGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPL 184
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV A+ ITAF + IT
Sbjct: 185 FVWAIFITAFLLLLSLPVLSAGIT 208
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
N+I F +VE+GA
Sbjct: 99 NSIGFWLLPMGLVCLVTSTLVESGA 123
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 96.7 bits (230), Expect = 6e-19
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = +1
Query: 481 TTCFSWSYYILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
++ SW N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Query: 661 SQERGKKETF 690
+ GK+E F
Sbjct: 236 AHYSGKREPF 245
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 95.5 bits (227), Expect = 1e-18
Identities = 39/52 (75%), Positives = 47/52 (90%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+LL DRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++
Sbjct: 314 MLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA 365
Score = 48.0 bits (109), Expect = 3e-04
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +2
Query: 260 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 439
G T YPP+S+ R+VD AIF++H++G SS + ++PLF
Sbjct: 231 GWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLF 290
Query: 440 V*AVGITAFXXXXXXXXXAGAIT 508
+V +TA+ AGAIT
Sbjct: 291 AWSVFVTAWLLLLSLPVLAGAIT 313
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 3 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 176
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 177 INNIRFXXXXXXXXXXXXXXIVENGAEQDEQFTP 278
+NN+ + +++ GA F P
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYP 236
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 95.5 bits (227), Expect = 1e-18
Identities = 39/50 (78%), Positives = 46/50 (92%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 657
+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 298 MLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
Score = 37.5 bits (83), Expect = 0.39
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +2
Query: 209 LPYIINFKKNCRKWCRTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 358
+P I + + C G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 204 VPSIFYMELSLYYGCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 95.1 bits (226), Expect = 2e-18
Identities = 43/57 (75%), Positives = 47/57 (82%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 678
++L DRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 209 MVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTISANSNK 265
Score = 56.8 bits (131), Expect = 6e-07
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 183 NIRFXXXXXXXXXXXXXXIVENG 251
NI + +ENG
Sbjct: 100 NISYLLLIPSIVLFLFAGGIENG 122
Score = 56.8 bits (131), Expect = 6e-07
Identities = 40/108 (37%), Positives = 49/108 (45%)
Frame = +2
Query: 185 YKILTPTPLPYIINFKKNCRKWCRTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 364
Y +L P+ + ++ F TG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 103 YLLLIPSIVLFL--FAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLL 160
Query: 365 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 508
+L LF AV ITA AG IT
Sbjct: 161 GAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGIT 208
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 94.7 bits (225), Expect = 2e-18
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 678
+LL DRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K
Sbjct: 235 MLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVISANSNK 291
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 183 NIRFXXXXXXXXXXXXXXIVENG 251
N+ + I+ENG
Sbjct: 126 NVSYWLLIPSLFLFVFAAIIENG 148
Score = 50.0 bits (114), Expect = 7e-05
Identities = 33/84 (39%), Positives = 37/84 (44%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG T+YPPLS +H VDL IF LHL+GISS +L L
Sbjct: 151 TGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLAL 210
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
F AV ITA A AIT
Sbjct: 211 FGWAVVITAVLLLLSLPVLAAAIT 234
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 93.9 bits (223), Expect = 4e-18
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL+DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K
Sbjct: 211 LLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHV 270
Query: 688 F 690
F
Sbjct: 271 F 271
Score = 42.7 bits (96), Expect = 0.010
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +2
Query: 260 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 358
G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 127 GWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 37.1 bits (82), Expect = 0.51
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 186 I 188
+
Sbjct: 102 L 102
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 93.9 bits (223), Expect = 4e-18
Identities = 71/169 (42%), Positives = 74/169 (43%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PL
Sbjct: 121 TGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPL 180
Query: 437 FV*AVGITAFXXXXXXXXXAGAITYY**IET*IHHFLILLEEETQFYINIXXXXXXXXXX 616
FV AVGITAF AGAIT F
Sbjct: 181 FVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
Query: 617 XXXXXQDLV*FLILFHXXXXXXXXXXXXXXFMLY*QLGY*DLLFELIIY 763
QDLV F +LF FM L Y DLLFELI+Y
Sbjct: 241 MFSFSQDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMY 289
Score = 87.4 bits (207), Expect = 4e-16
Identities = 46/84 (54%), Positives = 50/84 (59%)
Frame = +3
Query: 3 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
AELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AFPR+N
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 183 NIRFXXXXXXXXXXXXXXIVENGA 254
N+ F IVENGA
Sbjct: 96 NMSFWLLPPSLTLLISSSIVENGA 119
Score = 73.7 bits (173), Expect = 5e-12
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 615
+LL DRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 205 MLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 93.9 bits (223), Expect = 4e-18
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 678
++L DRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 234 MVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
EL PG I ++Q+YN+I+TAHA N L+PL++G PD+AFPR+N
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 183 NIRFXXXXXXXXXXXXXXIVENG 251
NI F I+E G
Sbjct: 128 NISFWLLPPSLLLLVFSAIIEGG 150
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2
Query: 272 YPPLSSNIAHRGRSVDLAIFSLHLAGISS 358
YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 162 YPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 91.9 bits (218), Expect = 2e-17
Identities = 40/52 (76%), Positives = 45/52 (86%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+LL DRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S
Sbjct: 251 MLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS 302
Score = 50.0 bits (114), Expect = 7e-05
Identities = 32/84 (38%), Positives = 42/84 (50%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVY PLS++ G +VD+AI SLH+AG SS + ++PL
Sbjct: 168 TGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPL 226
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V +TAF A AIT
Sbjct: 227 FVWSVLVTAFLLLLALPVLAAAIT 250
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 45 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/52 (75%), Positives = 43/52 (82%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+LL D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 214 MLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 35.1 bits (77), Expect = 2.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 45 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 188
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSI 105
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 88.2 bits (209), Expect = 2e-16
Identities = 49/84 (58%), Positives = 51/84 (60%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PL
Sbjct: 97 TGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPL 156
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
F+ AVGITA AGAIT
Sbjct: 157 FIWAVGITALLLLLSLPVLAGAIT 180
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/83 (53%), Positives = 49/83 (59%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 186 IRFXXXXXXXXXXXXXXIVENGA 254
+ F IVENGA
Sbjct: 73 MSFWLLPPSLILLISSSIVENGA 95
Score = 84.2 bits (199), Expect = 3e-15
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 627
+LL DRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 181 MLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 87.4 bits (207), Expect = 4e-16
Identities = 47/83 (56%), Positives = 56/83 (67%)
Frame = -2
Query: 250 PFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKA 71
P STI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA
Sbjct: 114 PLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKA 173
Query: 70 CAVTIVL*I*SSPINDPGFPNSA 2
AVT+ L I S PI PG PNSA
Sbjct: 174 WAVTMTL-IWSFPIKLPGCPNSA 195
Score = 73.3 bits (172), Expect = 6e-12
Identities = 43/84 (51%), Positives = 49/84 (58%)
Frame = -3
Query: 507 VIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEK 328
VIAPA TGS++N+K AV T TN G S I +R I+E PAKC+EK
Sbjct: 28 VIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEK 87
Query: 327 IARSTDLPLCAILDESGG*TVHPV 256
I STD P CAI SGG TVHPV
Sbjct: 88 IPMSTDAPACAIPLASGGYTVHPV 111
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -1
Query: 590 NKC*YKIGSPPPAGSKNDVFKFRSINNM 507
NKC + IGSPPPAGSK +VFKFRS+ ++
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSI 27
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 87.4 bits (207), Expect = 4e-16
Identities = 39/61 (63%), Positives = 49/61 (80%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL+DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPI 284
Query: 688 F 690
F
Sbjct: 285 F 285
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
+G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPL
Sbjct: 142 SGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPL 201
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V ITA A +T
Sbjct: 202 FVWSVLITAVLIILALPVLAAGLT 225
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 15 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 87.4 bits (207), Expect = 4e-16
Identities = 39/61 (63%), Positives = 49/61 (80%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 687
+LL+DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPI 284
Query: 688 F 690
F
Sbjct: 285 F 285
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
+G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPL
Sbjct: 142 SGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPL 201
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V ITA A +T
Sbjct: 202 FVWSVLITAVLIILALPVLAAGLT 225
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 15 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 84.2 bits (199), Expect = 3e-15
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = +1
Query: 499 SYYILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
S LL+DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS +
Sbjct: 215 SLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAV 268
Score = 49.6 bits (113), Expect = 9e-05
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 180 NNIRF 194
N + F
Sbjct: 109 NALSF 113
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 83.8 bits (198), Expect = 4e-15
Identities = 34/54 (62%), Positives = 45/54 (83%)
Frame = +1
Query: 502 YYILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+ ++ +DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 212 FLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 34.3 bits (75), Expect = 3.6
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 358
TG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 132 TGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 81.8 bits (193), Expect = 2e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+
Sbjct: 211 LILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
Score = 46.8 bits (106), Expect = 6e-04
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 21 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSF 105
Score = 35.5 bits (78), Expect = 1.6
Identities = 25/83 (30%), Positives = 32/83 (38%)
Frame = +2
Query: 260 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 439
G T+YP L H + D +F++HL GISS SF LF
Sbjct: 128 GWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLF 187
Query: 440 V*AVGITAFXXXXXXXXXAGAIT 508
+ A ITA AG +T
Sbjct: 188 IWAALITAILLIITLPVLAGGVT 210
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 78.6 bits (185), Expect = 2e-13
Identities = 52/132 (39%), Positives = 61/132 (46%)
Frame = +2
Query: 113 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRTG*TVYPPLSSN 292
W IWKL P NK YKILT PL Y K+N PL+S+
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRNSS-----------PLASS 76
Query: 293 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 472
IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV IT
Sbjct: 77 IAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFITTVLL 136
Query: 473 XXXXXXXAGAIT 508
AGAIT
Sbjct: 137 LLSLPVLAGAIT 148
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +1
Query: 490 FSWSYYILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQE 669
F + +LL+DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ +
Sbjct: 257 FGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKF 315
Query: 670 RGKK 681
G+K
Sbjct: 316 SGRK 319
Score = 34.3 bits (75), Expect = 3.6
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 186 IRF 194
I F
Sbjct: 155 IAF 157
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+LLIDR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I
Sbjct: 227 MLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 186 IRF 194
F
Sbjct: 119 FGF 121
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 75.4 bits (177), Expect = 2e-12
Identities = 38/83 (45%), Positives = 46/83 (55%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 186 IRFXXXXXXXXXXXXXXIVENGA 254
+ F VE+GA
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGA 105
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/84 (47%), Positives = 44/84 (52%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLS N AH G SVDLAIFSLHLAG+SS + + L
Sbjct: 107 TGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSL 166
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V ITA AGAIT
Sbjct: 167 FVWSVKITAILLLLSLPVLAGAIT 190
Score = 59.7 bits (138), Expect = 8e-08
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF 591
+LL DRN NTSFFDPAGGGDPILYQHLF
Sbjct: 191 MLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
++L D++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 192 LILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
Score = 35.1 bits (77), Expect = 2.1
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 260 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 358
G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 115 GWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 33.5 bits (73), Expect = 6.3
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 186 IRF 194
+ F
Sbjct: 95 LSF 97
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I
Sbjct: 219 LLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI 269
Score = 36.3 bits (80), Expect = 0.89
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 186 IRF 194
+ F
Sbjct: 114 VAF 116
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 681
+LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++
Sbjct: 295 MLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR 350
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 186 IRF 194
I F
Sbjct: 181 IAF 183
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 73.7 bits (173), Expect = 5e-12
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = +3
Query: 3 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
AEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AFPR+N
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN 87
Query: 183 NIRF 194
N+ F
Sbjct: 88 NMSF 91
Score = 66.9 bits (156), Expect = 6e-10
Identities = 41/84 (48%), Positives = 43/84 (51%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPL+ N+AH G SVDL IFSLHLAGISS S Q PL
Sbjct: 113 TGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPL 172
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV AV ITA A IT
Sbjct: 173 FVWAVLITAVLLLLSLPVLAAGIT 196
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.7 bits (173), Expect = 5e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3
Query: 582 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 752
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 73.3 bits (172), Expect = 6e-12
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +1
Query: 511 LLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
L++DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++
Sbjct: 225 LILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVA 275
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 73.3 bits (172), Expect = 6e-12
Identities = 39/91 (42%), Positives = 48/91 (52%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 186 IRFXXXXXXXXXXXXXXIVENGAEQDEQFTP 278
+ F V+ G +DE TP
Sbjct: 84 MSF-GFFPLHWHYYSFFTVKGGLARDELSTP 113
Score = 33.1 bits (72), Expect = 8.3
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 305 GRSVDLAIFSLHLAGISS 358
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 73.3 bits (172), Expect = 6e-12
Identities = 36/83 (43%), Positives = 45/83 (54%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 186 IRFXXXXXXXXXXXXXXIVENGA 254
I F +VE GA
Sbjct: 101 ISFWLLPPALFLLLGSSLVEQGA 123
Score = 66.5 bits (155), Expect = 7e-10
Identities = 39/84 (46%), Positives = 46/84 (54%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPL+S AH G SVD+AIFSLHLAG+SS + ++PL
Sbjct: 125 TGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPL 184
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V ITA AGAIT
Sbjct: 185 FVWSVLITAILLLLSLPVLAGAIT 208
Score = 60.9 bits (141), Expect = 4e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFG 603
+LL DR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 209 MLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 72.9 bits (171), Expect = 8e-12
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +1
Query: 511 LLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL 276
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 681
++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ ++
Sbjct: 369 MMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR 426
Score = 37.9 bits (84), Expect = 0.29
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 6 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 180 NNIRF 194
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/84 (47%), Positives = 47/84 (55%)
Frame = +3
Query: 3 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 183 NIRFXXXXXXXXXXXXXXIVENGA 254
N+ F VE GA
Sbjct: 100 NMSFWLLPPSFLLLLASSTVEAGA 123
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 72.1 bits (169), Expect = 1e-11
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 657
+LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 234 MLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
Score = 37.1 bits (82), Expect = 0.51
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 186 IRF 194
F
Sbjct: 123 AAF 125
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/51 (60%), Positives = 42/51 (82%)
Frame = +1
Query: 511 LLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
LL+DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 221 LLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
Score = 33.5 bits (73), Expect = 6.3
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 358
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
Score = 33.1 bits (72), Expect = 8.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 45 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISF 112
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 10/67 (14%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 657
+LL+DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 658 ISQERGK 678
IS K
Sbjct: 298 ISTHARK 304
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 70.5 bits (165), Expect = 4e-11
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 5/58 (8%)
Frame = +1
Query: 508 ILLIDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQ 666
+LL++R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +I +
Sbjct: 213 MLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVIQR 270
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 70.5 bits (165), Expect = 4e-11
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
++++DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I
Sbjct: 217 LMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI 267
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 69.7 bits (163), Expect = 8e-11
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+LL+DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 241 LLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
Score = 34.3 bits (75), Expect = 3.6
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 48 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/88 (46%), Positives = 47/88 (53%)
Frame = +2
Query: 245 KWCRTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 424
K TG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 39 KGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPX 98
Query: 425 QLPLFV*AVGITAFXXXXXXXXXAGAIT 508
++PLFV AV ITA AGAIT
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAIT 126
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGH 606
+LL DRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 127 MLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +1
Query: 508 ILLIDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 678
+LL+DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 68.1 bits (159), Expect = 2e-10
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+L +D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 164 MLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 41.1 bits (92), Expect = 0.031
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 18 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 67.7 bits (158), Expect = 3e-10
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
++ ++ FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++
Sbjct: 234 LVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA 285
Score = 41.9 bits (94), Expect = 0.018
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLN 128
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +1
Query: 511 LLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
Score = 36.7 bits (81), Expect = 0.67
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +3
Query: 3 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 183 NIRF 194
F
Sbjct: 124 AFGF 127
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1
Query: 493 SWSYYILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 651
S ++ +L +DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 239 SLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +1
Query: 517 IDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 690
++R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 209 LERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIF 265
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+L I+R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 234 LLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 66.5 bits (155), Expect = 7e-10
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLS +H G SVDLAIFSLHL+GISS + +LPL
Sbjct: 124 TGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPL 183
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV A+ +TA AGAIT
Sbjct: 184 FVWAIFVTAILLLLSLPVLAGAIT 207
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F VE GA
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGA 122
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF 591
+LL DRN NTSF+DPAGGGDPILYQHLF
Sbjct: 208 MLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 66.1 bits (154), Expect = 1e-09
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I
Sbjct: 228 MLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI 278
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 11/62 (17%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGIISH 654
+L +DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI+SH
Sbjct: 245 LLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSH 304
Query: 655 II 660
I+
Sbjct: 305 IL 306
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+L +DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II
Sbjct: 231 MLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 64.1 bits (149), Expect = 4e-09
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +1
Query: 481 TTCFSWSYYILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
T S ++ ++ FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++
Sbjct: 218 TPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV 277
Score = 42.3 bits (95), Expect = 0.014
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 185
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 186 IRF 194
+ F
Sbjct: 123 LSF 125
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 63.3 bits (147), Expect = 7e-09
Identities = 23/52 (44%), Positives = 39/52 (75%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
++L++R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S
Sbjct: 218 LVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS 269
Score = 35.9 bits (79), Expect = 1.2
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 6 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 62.9 bits (146), Expect = 9e-09
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+L ++R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 293 LLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 681
+L +DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+
Sbjct: 253 MLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR 310
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 678
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ GK
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 681
+L +DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK+
Sbjct: 252 LLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR 309
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +1
Query: 517 IDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
++R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 253 MERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+L ++R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +1
Query: 490 FSWSYYILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
F+ + +LL DR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 204 FAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/84 (44%), Positives = 43/84 (51%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLSS AH G SVDLAIF+LHL ISS + +LPL
Sbjct: 125 TGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPL 184
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV ++ ITAF + IT
Sbjct: 185 FVWSIFITAFLLLLSLPVLSAGIT 208
Score = 61.3 bits (142), Expect = 3e-08
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 630
+LL+DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F +VE+GA
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGA 123
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F VE GA
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGA 122
Score = 61.3 bits (142), Expect = 3e-08
Identities = 36/81 (44%), Positives = 42/81 (51%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPLS +H G SVDLAIFSLHL+GISS + +LPL
Sbjct: 124 TGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPL 183
Query: 437 FV*AVGITAFXXXXXXXXXAG 499
FV A+ +TA AG
Sbjct: 184 FVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F VE GA
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGA 122
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 10/67 (14%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGIISHI 657
+L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI S +
Sbjct: 260 LLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEV 319
Query: 658 ISQERGK 678
I+ K
Sbjct: 320 IATNARK 326
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
+L ++R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +1
Query: 511 LLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+ +DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 11/64 (17%)
Frame = +1
Query: 505 YILLIDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 651
+++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+ILP G++S
Sbjct: 245 FMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVS 304
Query: 652 HIIS 663
I++
Sbjct: 305 DILA 308
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 42 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSY 136
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 60.1 bits (139), Expect = 6e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFG 603
+LL+DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 209 MLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/69 (47%), Positives = 39/69 (56%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVYPPL+S AH G SVDLAIF+LH+ ISS + +LPL
Sbjct: 125 TGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPL 184
Query: 437 FV*AVGITA 463
FV A+ ITA
Sbjct: 185 FVWAILITA 193
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F +VE+GA
Sbjct: 99 NNIGFWLLPMGLVCLVTSTLVESGA 123
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 59.7 bits (138), Expect = 8e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1
Query: 514 LIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 630
+ DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 216 IFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
Score = 53.2 bits (122), Expect = 7e-06
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F +VE GA
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGA 128
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/84 (36%), Positives = 39/84 (46%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
TG TVY PL+ +H G +VDLAIFSLHL+G SS ++ +PL
Sbjct: 130 TGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPL 189
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
F AV TA A +T
Sbjct: 190 FAWAVLFTAILLLLSLPVLAAGLT 213
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS
Sbjct: 248 LLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS 299
Score = 37.5 bits (83), Expect = 0.39
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +3
Query: 3 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 183 NIRF 194
N+ F
Sbjct: 139 NLSF 142
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 595 FFGHPEVYILILPGFGIISHIISQERGKKETF 690
FFGHPEVYILILPGFG+ISHI++ GKKE F
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPF 33
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +1
Query: 511 LLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 678
L +DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S GK
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSGK 328
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +1
Query: 520 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 275 DRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 6 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+AFPR+
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 180 NNIRF 194
NNI F
Sbjct: 102 NNISF 106
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 56.8 bits (131), Expect = 6e-07
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 208 MLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
Score = 39.1 bits (87), Expect = 0.13
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 6 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 182
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 56.8 bits (131), Expect = 6e-07
Identities = 25/43 (58%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 630
+LL+DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
+G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPL
Sbjct: 142 SGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPL 201
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V ITA A +T
Sbjct: 202 FVWSVLITAVLIILALPVLAAGLT 225
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 15 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 436
+G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPL
Sbjct: 142 SGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPL 201
Query: 437 FV*AVGITAFXXXXXXXXXAGAIT 508
FV +V ITA A +T
Sbjct: 202 FVWSVLITAVLIILALPVLAAGLT 225
Score = 49.6 bits (113), Expect = 9e-05
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 645
+LL+DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 15 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 53.2 bits (122), Expect = 7e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1
Query: 610 EVYILILPGFGIISHIISQERGKKETF 690
EVYILILPGFG+ISHIISQE GKKE F
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAF 181
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 53.2 bits (122), Expect = 7e-06
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F +VE GA
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGA 128
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 52.8 bits (121), Expect = 1e-05
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +1
Query: 556 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
GGG P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
Score = 34.7 bits (76), Expect = 2.7
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 42 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 194
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 517 IDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
++ L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S
Sbjct: 229 LEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS 277
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 260 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 358
G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 20 GWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 48.8 bits (111), Expect = 2e-04
Identities = 20/54 (37%), Positives = 38/54 (70%)
Frame = +1
Query: 502 YYILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 663
+++LL+ ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 236 FFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 179
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 180 NNIRFXXXXXXXXXXXXXXIVENGA 254
NNI F +VE+GA
Sbjct: 99 NNISFWLLPPALVCLVTSTLVESGA 123
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2
Query: 269 VYPPLSSNIAHRGRSVDLAIFSLHLAGISS 358
VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 118 VYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 33.5 bits (73), Expect = 6.3
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +3
Query: 9 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 188
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 189 RF 194
F
Sbjct: 91 SF 92
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 595 FFGHPEVYILILPGFGIISHI 657
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 44.8 bits (101), Expect = 0.003
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 547 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 681
D G +L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 243 DADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 43.2 bits (97), Expect = 0.008
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +2
Query: 257 TG*TVYPPLSSNIAHRGRSVDLAIFS 334
TG TVYPPLSS AH G SVDLAI+S
Sbjct: 40 TGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 39.9 bits (89), Expect = 0.072
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +3
Query: 510 IINRSKLKYIIF*SCWRRRPNFISTFILIFWT 605
IIN K KY IF W P +STFILIFWT
Sbjct: 121 IINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 141 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA 254
L+LGAPD+AFPR+NN+ F +VENGA
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGA 38
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 43.2 bits (97), Expect = 0.008
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +1
Query: 508 ILLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 630
+LL DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 41 MLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 582 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSY 761
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 762 I 764
+
Sbjct: 61 V 61
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.67
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 538 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 660
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.6
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 559 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 675
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 35.5 bits (78), Expect = 1.6
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +3
Query: 516 NRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWL 695
N SKL++I+ S PN I ILI T L+ N T I ++ +K N
Sbjct: 115 NSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNSTSIRNRITHLHNIFSQKSNILY 174
Query: 696 FRNNLCYTSNW 728
++NNL ++ W
Sbjct: 175 YKNNLRHSIYW 185
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 607 PEVYILILPGFGIISHIISQERGKK 681
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 565 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 678
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 4.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 571 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 678
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,819,535
Number of Sequences: 1657284
Number of extensions: 10301002
Number of successful extensions: 20932
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 19842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20844
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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