Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0605
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039044-4|AAG24122.3|  328|Caenorhabditis elegans Serpentine re...    30   1.7  
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr...    29   2.9  

>AF039044-4|AAG24122.3|  328|Caenorhabditis elegans Serpentine
           receptor, class t protein17 protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +1

Query: 511 LLIDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 657
           ++ + N ++ F DP  G DP LY++    F +  V I  +  +G IS++
Sbjct: 184 VVFNENYSSWFTDPGLGHDPALYKNSLIAFNNFAVAICTIVFYGYISYV 232


>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
           protein F44G4.8 protein.
          Length = 1367

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 616 KLQDVQKIKINVDIKLGLLLQQDQKMMYLSFDLLIICN 503
           KLQD+QK+K +VD+ +   L +D+  + +  D   ICN
Sbjct: 822 KLQDIQKVKQDVDVSIFEELGEDETCLEVRADR--ICN 857


>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
           protein F44G4.8 protein.
          Length = 1367

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 616 KLQDVQKIKINVDIKLGLLLQQDQKMMYLSFDLLIICN 503
           KLQD+QK+K +VD+ +   L +D+  + +  D   ICN
Sbjct: 822 KLQDIQKVKQDVDVSIFEELGEDETCLEVRADR--ICN 857


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,643,623
Number of Sequences: 27780
Number of extensions: 251806
Number of successful extensions: 480
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)