Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0603
         (376 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   4.8  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   4.8  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   6.3  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    21   6.3  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    21   6.3  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    21   6.3  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    21   6.3  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    21   6.3  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    21   6.3  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    21   6.3  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   6.3  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    20   8.3  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    20   8.3  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    20   8.3  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    20   8.3  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 363 NSINKVFD*NTFNYNRYKTMISSTNF 286
           N+ N  ++ N  NYN YK +  + N+
Sbjct: 99  NNYNN-YNYNNNNYNNYKKLYYNINY 123


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 230 LNQTNFFIIDLEFFL 274
           L +T  F +DLEF+L
Sbjct: 76  LRRTEAFEVDLEFYL 90


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 336 NTFNYNRYKTMISSTNF 286
           N  NYN YK +  + N+
Sbjct: 99  NNNNYNNYKKLYYNINY 115


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 336 NTFNYNRYKTMISSTNF 286
           N  NYN YK +  + N+
Sbjct: 99  NNNNYNNYKKLYYNINY 115


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 336 NTFNYNRYKTMISSTNF 286
           N  NYN YK +  + N+
Sbjct: 99  NNNNYNNYKKLYYNINY 115


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 336 NTFNYNRYKTMISSTNF 286
           N  NYN YK +  + N+
Sbjct: 99  NNNNYNNYKKLYYNINY 115


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 336 NTFNYNRYKTMISSTNF 286
           N  NYN YK +  + N+
Sbjct: 99  NNNNYNNYKKLYYNINY 115


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 336 NTFNYNRYKTMISSTNF 286
           N  NYN YK +  + N+
Sbjct: 99  NNNNYNNYKKLYYNINY 115


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 336 NTFNYNRYKTMISSTNF 286
           N  NYN YK +  + N+
Sbjct: 99  NNNNYNNYKKLYYNINY 115


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 336 NTFNYNRYKTMISSTNF 286
           N  NYN YK +  + N+
Sbjct: 99  NNNNYNNYKKLYYNINY 115


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 336 NTFNYNRYKTMISSTNF 286
           N  NYN YK +  + N+
Sbjct: 97  NNNNYNNYKKLYYNINY 113


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 17  YEYSDFNNIEFDSY 58
           Y+YS++NN   ++Y
Sbjct: 89  YKYSNYNNYNNNNY 102


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 17  YEYSDFNNIEFDSY 58
           Y+YS++NN   ++Y
Sbjct: 89  YKYSNYNNYNNNNY 102


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 17  YEYSDFNNIEFDSY 58
           Y+YS++NN   ++Y
Sbjct: 89  YKYSNYNNYNNNNY 102


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 17  YEYSDFNNIEFDSY 58
           Y+YS++NN   ++Y
Sbjct: 89  YKYSNYNNYNNNNY 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,441
Number of Sequences: 438
Number of extensions: 1603
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)