Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0599
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0022 - 15536811-15536899,15537485-15537664,15537706-155379...    29   5.4  
03_05_1110 - 30466886-30467317,30467522-30467603,30467749-30467810     28   7.1  

>06_03_0022 -
           15536811-15536899,15537485-15537664,15537706-15537982,
           15538680-15538883,15539431-15539496,15539933-15539953,
           15541622-15541731,15543244-15544236,15544928-15544955,
           15545035-15545093,15545177-15545204,15545453-15545475,
           15545784-15545853,15546980-15547033,15547127-15547169,
           15548126-15548175
          Length = 764

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -3

Query: 120 HGRVRRCLFQGCQSYKGPHVNTKFDVCH 37
           HG  RRC F GC   KG   NT F + H
Sbjct: 297 HGGGRRCRFDGC--VKGAQGNTDFCIGH 322


>03_05_1110 - 30466886-30467317,30467522-30467603,30467749-30467810
          Length = 191

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -1

Query: 722 IRFFFGRDNVF*IDED 675
           I+F+ GRD+VF IDED
Sbjct: 176 IKFYIGRDSVFIIDED 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,727,317
Number of Sequences: 37544
Number of extensions: 322671
Number of successful extensions: 647
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)