Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0598
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.55 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.9  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -2

Query: 466 SCSSMPWLTLP-LECSGLGLFFLVASRYSGFPSSMT----GMQSSAMNTNT 329
           S +SM  +++P + CS  G  F  +   SG P  M     GM SS+M   T
Sbjct: 28  SMNSMSCVSMPSMNCSPQGASFGSSMLNSGMPGGMAMNGNGMTSSSMGYTT 78


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 394 SPLRRTTPSPNIPTAASTKASSCRSRPTS 480
           SP     P+P+ P + S    +CR  P S
Sbjct: 54  SPTPGDVPTPSSPRSISEDPLNCRDLPNS 82


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +1

Query: 46  VCMSVVNYNFFKRRYSIFLE 105
           VC +V N+ +F+R+  + ++
Sbjct: 199 VCQTVSNFEYFQRKILLMIQ 218


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +1

Query: 46  VCMSVVNYNFFKRRYSIFLE 105
           VC +V N+ +F+R+  + ++
Sbjct: 125 VCQTVSNFEYFQRKILLMIQ 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,727
Number of Sequences: 336
Number of extensions: 2426
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)