Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0597
(749 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 166 4e-40
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 153 3e-36
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 146 5e-34
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 133 4e-30
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 132 1e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 127 3e-28
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 111 2e-23
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 110 4e-23
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 105 2e-21
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 97 4e-19
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 94 4e-18
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 90 5e-17
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 89 1e-16
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 87 6e-16
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 85 1e-15
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 82 1e-14
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 80 5e-14
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 79 2e-13
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 73 6e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 1e-11
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 72 1e-11
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 72 2e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 71 2e-11
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 71 3e-11
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 70 5e-11
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 69 1e-10
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 68 2e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 68 2e-10
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 67 5e-10
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 65 2e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 65 2e-09
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 64 4e-09
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 64 4e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 63 6e-09
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 60 4e-08
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 60 8e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 5e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 56 9e-07
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 55 2e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 9e-06
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 52 2e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 5e-05
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 49 1e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 2e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 48 3e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 4e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 47 6e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 45 0.002
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.005
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.007
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.009
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.028
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.028
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 40 0.049
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 40 0.065
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.26
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 38 0.35
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.35
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 38 0.35
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.35
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 38 0.35
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.35
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.46
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.46
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 37 0.61
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.61
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 36 1.1
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.1
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.4
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 35 2.5
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 35 2.5
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.5
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.5
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 3.3
UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_Q4QDA2 Cluster: Putative uncharacterized protein; n=2; ... 33 5.7
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 5.7
UniRef50_UPI0000E49E25 Cluster: PREDICTED: similar to smaphorin ... 33 7.5
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 33 7.5
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.5
UniRef50_Q0W6L0 Cluster: Predicted signal transduction protein; ... 33 7.5
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 9.9
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 9.9
UniRef50_Q87KI0 Cluster: 3-octaprenyl-4-hydroxybenzoate carboxy-... 33 9.9
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 33 9.9
UniRef50_Q9BSM1 Cluster: Polycomb group RING finger protein 1; n... 33 9.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 166 bits (404), Expect = 4e-40
Identities = 80/88 (90%), Positives = 83/88 (94%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAI
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAI 151
Query: 435 RGAIILAKLSVLPVRRGYWGNKIGN-HT 515
RGAIILAKLS++PVRRGYWGNKIG HT
Sbjct: 152 RGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 129 bits (311), Expect = 8e-29
Identities = 59/81 (72%), Positives = 61/81 (75%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
KPHTVPCKVTG+CGSV VRLIP PRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGN
Sbjct: 176 KPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGN 235
Query: 686 FXXXXXXXXXXXXXXLTPDLW 748
F LTPDLW
Sbjct: 236 FAKATFDAISKTYSYLTPDLW 256
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKE 90
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 153 bits (372), Expect = 3e-36
Identities = 75/88 (85%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAI
Sbjct: 32 EIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAI 91
Query: 435 RGAIILAKLSVLPVRRGYWGNKIGN-HT 515
RGAIILAKLS++PV RGYWGNKIG HT
Sbjct: 92 RGAIILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEP 577
KPHTVPCKVTG+C SV V LIP P
Sbjct: 116 KPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +1
Query: 163 VPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
+PVTKLG L+ + KI LE IYLFSLPIKE
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKE 30
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 146 bits (354), Expect = 5e-34
Identities = 67/106 (63%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Frame = +3
Query: 201 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 380
K + E L + +I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 381 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGN-HT 515
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G+ HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 112 bits (270), Expect = 8e-24
Identities = 49/80 (61%), Positives = 59/80 (73%)
Frame = +2
Query: 509 PHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 688
PHTVP KV+GKCGSVTVRL+P PRG G+V+APV K+ LQ+AG++DCYT +RGST TLGNF
Sbjct: 150 PHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNF 209
Query: 689 XXXXXXXXXXXXXXLTPDLW 748
LTP+LW
Sbjct: 210 VKAAFAAASLTYGILTPNLW 229
Score = 62.9 bits (146), Expect = 8e-09
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKE 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 133 bits (322), Expect = 4e-30
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 471 PVRRGYWGNKIG 506
P+R+GYWGNKIG
Sbjct: 108 PLRQGYWGNKIG 119
Score = 116 bits (279), Expect = 6e-25
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
KP+TVPCKVTG CGSV V LIP PRGTG+VSAPVPKKLL MAG+ DCYTSAR T +LGN
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGN 179
Query: 686 FXXXXXXXXXXXXXXLTPDLW 748
F LTPDLW
Sbjct: 180 FAKATFDTISKTYTYLTPDLW 200
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 132 bits (318), Expect = 1e-29
Identities = 62/101 (61%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +3
Query: 219 EHLLVF-FTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 395
EH+ +F + +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 396 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGN-HT 515
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/81 (55%), Positives = 52/81 (64%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
+PHT+P KV GKCGSV VRLIP PRG GIV++ KK+L MAG+ D YT +RG T TLGN
Sbjct: 166 EPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLGN 225
Query: 686 FXXXXXXXXXXXXXXLTPDLW 748
LTPDLW
Sbjct: 226 SVKATYEALKNSYGFLTPDLW 246
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 145 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKE 80
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 127 bits (306), Expect = 3e-28
Identities = 58/87 (66%), Positives = 70/87 (80%)
Frame = +3
Query: 246 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 425
+ +IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 426 TAIRGAIILAKLSVLPVRRGYWGNKIG 506
AIR II+AKLSV+P+RRGYWG +G
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/81 (54%), Positives = 54/81 (66%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
+PH++ K TGKCGSVTVRLIP PRG+GIV++P KKLLQ+AGV+D YT + G T TL N
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLEN 209
Query: 686 FXXXXXXXXXXXXXXLTPDLW 748
LTP+LW
Sbjct: 210 TLKAAFVAIGNTYGFLTPNLW 230
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1
Query: 148 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKELR 258
++K WVPVTKLGRLV+ GKI +E I+L SLP+KE +
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQ 67
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 111 bits (267), Expect = 2e-23
Identities = 54/84 (64%), Positives = 56/84 (66%)
Frame = +2
Query: 497 QDRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 676
Q R KVTG+CGSV VRLIP PRGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
Query: 677 LGNFXXXXXXXXXXXXXXLTPDLW 748
LGNF LTPDLW
Sbjct: 175 LGNFAKATFDAISKTYSYLTPDLW 198
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 356
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKE 90
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 110 bits (264), Expect = 4e-23
Identities = 51/69 (73%), Positives = 55/69 (79%)
Frame = +2
Query: 476 PKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTS 655
P+ G + RKPHTVP KVTG+CGSV VRLIP PRGTG VSAPVPKKLL MAG+ DCYTS
Sbjct: 106 PRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTS 165
Query: 656 ARGSTGTLG 682
ARG T T G
Sbjct: 166 ARGHTATWG 174
Score = 96.7 bits (230), Expect = 5e-19
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +3
Query: 342 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 503
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEI 114
Score = 33.5 bits (73), Expect = 5.7
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 148 DQKEWVPVTKLGRLVREGKI 207
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 105 bits (251), Expect = 2e-21
Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AI
Sbjct: 53 EIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAI 112
Query: 435 RGAIILAKLSVLPVRRGYWGNKIGN-HTPS 521
RGAI AK ++ PVR G W G HT S
Sbjct: 113 RGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 84.6 bits (200), Expect = 2e-15
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
KPHTV CK +GKCG+ V++IP PRGTGI+S V KK+ ++AG++D YT + G+T T N
Sbjct: 137 KPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTEN 196
Query: 686 FXXXXXXXXXXXXXXLTPDLW 748
F + PD W
Sbjct: 197 FAKASIAALEATSSMILPDQW 217
Score = 39.9 bits (89), Expect = 0.065
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
++++ EW+P T +GRLV+ KI LE I+ FS I+E
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIRE 51
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 97.1 bits (231), Expect = 4e-19
Identities = 48/74 (64%), Positives = 50/74 (67%)
Frame = +2
Query: 527 KVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 706
KVTG+CGSV VRL PRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFD 183
Query: 707 XXXXXXXXLTPDLW 748
LTPDLW
Sbjct: 184 AISKIYSYLTPDLW 197
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 356
EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 249
K + KEW+P TKLG LV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 93.9 bits (223), Expect = 4e-18
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 398
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 67 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKE 65
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 90.2 bits (214), Expect = 5e-17
Identities = 46/80 (57%), Positives = 52/80 (65%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
+PH VPC+VTG+CGS+ V LIP PRGTG VSAPVP KLL MAG+ D +SA G T TLGN
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGN 209
Query: 686 FXXXXXXXXXXXXXXLTPDL 745
F L PDL
Sbjct: 210 FTKAIFDTISKTHSYLIPDL 229
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 312 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 491
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 492 GNKIGNH 512
G ++ H
Sbjct: 148 GKRLEPH 154
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 151 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKELRSLISSSARP 285
+ +W+P+TKLG LV+E KI LE IY FSL + LRSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 89.0 bits (211), Expect = 1e-16
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 473 SPKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYT 652
S ++ LG + K H V CKVTG CGSV V LIP RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 653 SARGSTGTLGNF 688
SARG T +L F
Sbjct: 61 SARGCTASLDYF 72
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 86.6 bits (205), Expect = 6e-16
Identities = 40/60 (66%), Positives = 41/60 (68%)
Frame = +2
Query: 569 PEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 748
P PRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF LTPDLW
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW 60
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/78 (55%), Positives = 49/78 (62%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXX 694
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL NF
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDK 219
Query: 695 XXXXXXXXXXXXLTPDLW 748
LTP+LW
Sbjct: 220 ATFNAISNTYSYLTPNLW 237
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +3
Query: 243 NQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 422
N++ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 423 ATAI 434
ATAI
Sbjct: 143 ATAI 146
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 395
EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 20 EIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 42.3 bits (95), Expect = 0.012
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
Frame = +1
Query: 202 KIDKLESIYLFSLPIKELRSL---ISSSARP*MMRFL--RSCLYRNKHVPDSAHVS-RHL 363
KI LE IYLFSLPIKE + + +S + +++ + R + A V+ R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 364 LPLATTTVILVWV*SAARKSPLPFEALLSLLSCQFYQSXXXXXXXXXXXXHRPLQGHRQV 543
A +L R+ P +L C +++ HRPLQG R +
Sbjct: 62 NGYAGRVEVLQ---GGGRRHPRGHHPDQAL-HC--HRAQRLLGEQDRQAPHRPLQGDRPL 115
Query: 544 WFRNSPADS*TSWYWYCVCASS*EASSDGWCTGLLHVSSWFNWHLGKFC*SHIRC 708
+W+ + + + EA+ D W LLH+S + H G+ H+ C
Sbjct: 116 RLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQLRQRHLGC 170
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = +2
Query: 491 G*QDRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 664
G + KPHTV CKVTG GSV++ LIP PR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 73.7 bits (173), Expect = 4e-12
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I
Sbjct: 80 EIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVANTI 130
Query: 435 RGAIILAKLSVLPVRRGYWGNKIGN-HT 515
+ IIL KL ++PV RGY G+K HT
Sbjct: 131 QRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 166 PVTKLGRLVREGKIDKLESIYLFSLPIKE 252
P +KLG LV++ +I L IYLFSLPIKE
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKE 78
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 78.6 bits (185), Expect = 2e-13
Identities = 41/88 (46%), Positives = 59/88 (67%)
Frame = -1
Query: 500 LVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLF 321
LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L
Sbjct: 29 LVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLL 88
Query: 320 LYRHDLKNLIIQGRAEEEINDLNSLIGK 237
L HDL++ ++Q A+EEI+DL G+
Sbjct: 89 LDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/80 (42%), Positives = 55/80 (68%)
Frame = +3
Query: 246 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 425
+ +EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 426 TAIRGAIILAKLSVLPVRRG 485
+ IR AI AKL+++PV RG
Sbjct: 80 STIRKAIDKAKLNMIPVMRG 99
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 688
+VP K+TG+ GS V L+P P G G+V + +++L +AGV D ++ + G T T N+
Sbjct: 112 SVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINY 169
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/88 (43%), Positives = 58/88 (65%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AI
Sbjct: 48 EIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAI 106
Query: 435 RGAIILAKLSVLPVRRGYWGNKIGNHTP 518
R AI AKLS++ VR G + G +P
Sbjct: 107 RKAIAHAKLSLIKVRVGCGSWECGCGSP 134
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +2
Query: 509 PHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 688
PH++P G CGSV V L+P PRG G+V+ V K +L +AGV+D +T G T T NF
Sbjct: 134 PHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNF 193
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = +2
Query: 503 RKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 682
R+PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T
Sbjct: 136 RRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTV 195
Query: 683 NF 688
NF
Sbjct: 196 NF 197
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Frame = +3
Query: 255 EIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 422
EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV
Sbjct: 48 EIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEV 106
Query: 423 ATAIRGAIILAKLSVLPVRRG 485
AIR AI AKL+++ ++RG
Sbjct: 107 GIAIRKAINYAKLNIIEIKRG 127
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 157 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
EW P TKLG +V+EG+I + I+ IKE
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKE 46
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
+I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV AI
Sbjct: 96 QIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAI 154
Query: 435 R 437
+
Sbjct: 155 Q 155
Score = 59.3 bits (137), Expect = 1e-07
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 7/174 (4%)
Frame = +1
Query: 151 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKELR----SLISSSARP*MMRFLRSCLY 318
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE + L + P + ++
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 319 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSC--QFYQS-XXXX 489
+ A+V ++ + + L W +A++ + L +L C QF S
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQTQFDSSQKRIL 175
Query: 490 XXXXXXXXHRPLQGHRQVWFRNSPADS*TSWYWYCVCASS*EASSDGWCTGLLH 651
H P+Q R+ S S T YWY E ++GW LLH
Sbjct: 176 GKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +3
Query: 231 VFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 410
+FF N ++ ++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKL--VNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 411 SKEVATAIRGAIILAKLSVLPVRRGYW 491
S + I+ A+ AKL++ +RRGYW
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW 176
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = +2
Query: 497 QDRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 676
++ KP+T+ K +GK GSV V + P P+GTGIV++ +L+++G++DC+T + G T +
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKS 238
Query: 677 LGNFXXXXXXXXXXXXXXLTPDLW 748
N +TPD W
Sbjct: 239 SFNTIKATFNALSSSYKFVTPDYW 262
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/83 (45%), Positives = 57/83 (68%)
Frame = -1
Query: 494 TPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 315
TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 314 RHDLKNLIIQGRAEEEINDLNSL 246
R D+ N I+Q ++ +NDL L
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFL 193
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/62 (51%), Positives = 48/62 (77%)
Frame = +2
Query: 500 DRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 679
D+K H+VP KV GK GSVT+ +IP PRG G+V+ K+LL++AG++D +T+A+GST T+
Sbjct: 162 DQK-HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTM 220
Query: 680 GN 685
+
Sbjct: 221 NS 222
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +3
Query: 279 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 458
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 459 LSVLPVRRG 485
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = +2
Query: 518 VPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 688
V KVT GSV V LIP PRGTGIVSAPV K L AG+ +CY SAR T TL NF
Sbjct: 59 VQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNF 115
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +3
Query: 318 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 461
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/60 (58%), Positives = 40/60 (66%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
KPHTV C+VT SV V I PRGT I+SAPVPKKLL+MA + D + ARG T L N
Sbjct: 76 KPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN 135
Score = 67.3 bits (157), Expect = 4e-10
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 264 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 443
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 444 IILAKLSVLPVRRGYWGNKIGN-HTPS 521
IIL + S+ G+ GNKI HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
+PH++P KV GK GSV V L+P P+GTG+V V K LL AG++D +++ +G T T N
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTEN 189
Query: 686 F 688
F
Sbjct: 190 F 190
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI
Sbjct: 45 EIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAI 103
Query: 435 RGAIILAKLSVLPVRRG 485
+ AI AK++++PVRRG
Sbjct: 104 QKAIRDAKMNIIPVRRG 120
Score = 37.1 bits (82), Expect = 0.46
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 154 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
+EW P T +G LV+EGKI ++ ++ +LPI E
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITE 43
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = +2
Query: 500 DRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 676
D+K H+VP KV GK GSV + ++P PRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 143 DQK-HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 279 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 458
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 459 LSVLPVRRG 485
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +3
Query: 246 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 425
+ E+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 426 TAIRGAIILAKLSV 467
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 65.3 bits (152), Expect = 2e-09
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI
Sbjct: 90 EIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAI 148
Query: 435 RGAIILAKLSVLPVRR--GYWGNKIGNHTPSLAR 530
+ AI +AKL+++ V R G W ++ G T SL R
Sbjct: 149 QKAIDVAKLNIIEVDRGSGSWEDQPGG-TNSLTR 181
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +2
Query: 527 KVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
K GK GSVTV + P P+G G+ +A + +L++AGV+D +T++ G+T T N
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVN 234
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 64.1 bits (149), Expect = 4e-09
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = +3
Query: 246 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 425
+ EI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 426 TAIRGAIILAKL-SVLPVRRGYWGNKIGNHTPSLARSPASV 545
TA+ + + L S LP R Y GN I T R+ S+
Sbjct: 79 TAVGLSSWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
Score = 54.4 bits (125), Expect = 3e-06
Identities = 40/96 (41%), Positives = 48/96 (50%)
Frame = +2
Query: 461 VSSTSPKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQ 640
+SS P+ G RKP T PCK TG S++ L PE IVS VP+KL+ A +
Sbjct: 90 LSSCLPRDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 641 DCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 748
CYTSAR T TLGN TP+LW
Sbjct: 145 SCYTSARSYTVTLGNIAKATFDAVSKTSHS-TPNLW 179
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
+I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI
Sbjct: 37 QIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAI 95
Query: 435 RGAIILAKLSVLPVRRG 485
+ AI AKL+++ ++RG
Sbjct: 96 KKAIDNAKLNIIEIKRG 112
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
KPHT+P V GK GSV+V L P P+G G+ V K +L+MAG+ D + A G T T N
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVN 181
Query: 686 F 688
+
Sbjct: 182 Y 182
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 154 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
+EW P T+LGRLV G+I + LP+KE
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKE 35
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 63.3 bits (147), Expect = 6e-09
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
+PHTV + GK GSV V L P PRG G+ +K+L++AG++D +T + G+T T N
Sbjct: 124 RPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVN 183
Query: 686 F 688
F
Sbjct: 184 F 184
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI
Sbjct: 39 EVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAI 97
Query: 435 RGAIILAKLSVLPVRRG 485
+ AI +AKL+++ V RG
Sbjct: 98 QKAIDIAKLNIIDVSRG 114
Score = 33.5 bits (73), Expect = 5.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 160 WVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
W P T+LG+ V EG+ID ++ LP+KE
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKE 37
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = -3
Query: 687 KFPKVPVEPRADV*QSCTPAI*RSFLGTGADTIPVPRGSGISRTVTEPHLPVTLQGTVCG 508
K PKV V+P A V QS P+ FLGT A+ +PVP G+G+ T TEP P+TL G +CG
Sbjct: 12 KSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCG 70
Query: 507 FLSCYP 490
P
Sbjct: 71 ACCLLP 76
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 59.7 bits (138), Expect = 8e-08
Identities = 41/88 (46%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 434
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 435 RGAIILAKLSVLPVRRGYWGNKIGN-HT 515
+ AI L + + GY GNKIGN HT
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKIGNPHT 131
Score = 46.4 bits (105), Expect = 8e-04
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 509 PHTVPCKVTG-KCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGV 637
PHT+PC VT + V V L PRGTG VSA VPKKL +A +
Sbjct: 129 PHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 249
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 276 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 455
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 456 KLSVL--PVRRGY 488
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
K +++P ++ + G+ +V + P GTG+V+ + +L++AG Q+ G+ L N
Sbjct: 138 KDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNARGKQLGTDNALNN 197
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +2
Query: 509 PHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
PH++P +V GK GSV V L P P+G GIV+ KK+ ++AG++D + + G T T N
Sbjct: 138 PHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKTKMN 196
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +3
Query: 318 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 485
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 37.9 bits (84), Expect = 0.26
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 154 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
+EW P TKLGRLV+EGKI ++ I I+E
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIRE 37
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +3
Query: 246 QRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 425
+ E+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 426 TAIRGAIIL 452
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 9e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 465 VLPV 476
++ V
Sbjct: 72 LISV 75
Score = 41.9 bits (94), Expect = 0.016
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 667
T+P ++ G+ GS V + P GTG++S + +L++AGV D T + GS
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/75 (32%), Positives = 45/75 (60%)
Frame = +3
Query: 252 IEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATA 431
++ DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA
Sbjct: 502 VDADDFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATA 561
Query: 432 IRGAIILAKLSVLPV 476
++ A++ AK SV+ V
Sbjct: 562 VKRALVDAKKSVVRV 576
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
T+P +V K + ++P GTG+++ + +L++AGVQ+ G L N
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 282 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 461
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 462 SVLPVRR 482
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +2
Query: 530 VTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 679
V G+ G+ V L+P P GTGI++ + ++++AG D YT +RG+ +
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM 173
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +3
Query: 279 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 458
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 459 LSVLPV 476
++ +
Sbjct: 73 KQLVRI 78
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 667
T+P G+ G+ L P +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 581 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 688
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 465 VLPVR 479
+ V+
Sbjct: 138 MYKVK 142
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 679
K T+ +V GK G+ V + P P+GTG+++ K +L++ G +D Y+ G +L
Sbjct: 145 KNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTSL 202
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 471 PV 476
+
Sbjct: 71 KI 72
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 667
K +T+P ++ GK G+ T+ + P GTG+++ +++L++ GV D T +GS
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 471 PV 476
V
Sbjct: 77 EV 78
Score = 40.7 bits (91), Expect = 0.037
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 679
T+P +V G+ + V L P GTGI++ + ++++AG+Q+ T + GST L
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL 138
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +3
Query: 171 HQTRPSCSRRKNRQTREHLLVFFT--NQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 344
++T + N QT+ F N+R + F ++V+ I V K T+ G+
Sbjct: 3 NKTEVVVAENANNQTQPERKKFDRKPNRRPQGPKQFQKDDFEEKVVTIRRVTKVTKGGRH 62
Query: 345 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 476
RF A V +GD G +GLG + EV AI+ A+ AK +++ V
Sbjct: 63 FRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRV 106
Score = 37.5 bits (83), Expect = 0.35
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 664
TVP +V G G+ V + P GTG+++ + ++++AG+ D Y + G
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 48.0 bits (109), Expect = 2e-04
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 471 --PVRRGYWGNKI--GNHTPSLARSPA 539
PV G ++I N T + PA
Sbjct: 79 TVPVENGTIPHEIVGENSTSRVLLKPA 105
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 667
T+P ++ G+ + V L P GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +3
Query: 255 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 398
+I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 66 QIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 40.3 bits (90), Expect = 0.049
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 166 PVTKLGRLVREGKIDKLESIYLFSLPIKE 252
PVTKLGRLV++GK+ ++ I+ F + IKE
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKE 64
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 471 PV 476
V
Sbjct: 209 QV 210
Score = 38.7 bits (86), Expect = 0.15
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
K T P + G G+ V L P GTG+++ + +L+MAGV++ GS L N
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNN 273
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 670
K HT+P +V GK S V L P GTGI++ + +++ AG+QD T + GS+
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSS 150
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 288 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 467
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 468 LPV 476
+ +
Sbjct: 91 VKI 93
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 443
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +2
Query: 479 KRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSA 658
K L+ K ++P V G G+ + + P G+G+++ + +L++AG+++
Sbjct: 84 KNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQ 143
Query: 659 RGSTGTLGN 685
GS L N
Sbjct: 144 LGSDNLLNN 152
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 471 PV 476
V
Sbjct: 246 TV 247
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
T P + G G+ V L P GTG+++ + +L+MAGV++ S L N
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIRSKNALNN 310
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 276 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 455
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 456 KLSVL--PVRRG 485
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +3
Query: 276 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 455
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 456 KLSVLPVRR 482
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 667
T+ V G + TV L P GTG+++ + +++ AG+ D T + GS
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1
Query: 160 WVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
W PVTKLGRLV++GK+ ++ I+ F + IKE
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKE 65
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 464
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 465 VLPVRRG 485
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 471 PV 476
V
Sbjct: 128 RV 129
Score = 40.3 bits (90), Expect = 0.049
Identities = 20/73 (27%), Positives = 39/73 (53%)
Frame = +2
Query: 467 STSPKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDC 646
S + K L+ K +++P ++G G+ V L P GTG+++ + +L++AG+++
Sbjct: 120 SDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNV 179
Query: 647 YTSARGSTGTLGN 685
+ GS L N
Sbjct: 180 LAKSLGSKSPLNN 192
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 465 VLPV 476
V+ V
Sbjct: 88 VIRV 91
Score = 42.3 bits (95), Expect = 0.012
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 670
TVP V G G+ + ++P RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 471 PV 476
V
Sbjct: 104 RV 105
Score = 33.5 bits (73), Expect = 5.7
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 679
T+ V G+ + V L P GTG+++ + +L+ AGV D + GS +
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAI 165
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.028
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 471 PV 476
V
Sbjct: 79 EV 80
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 685
K +++ G G V + P GTG+++ + +L++AGV++ GS L N
Sbjct: 84 KSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPLNN 143
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 458
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 667
++P +V G G+ V L P GTG+++ + +L+ AGV + T GS
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 40.3 bits (90), Expect = 0.049
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = -1
Query: 254 NSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 147
NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 18 NSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 39.9 bits (89), Expect = 0.065
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 527 KVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 664
+V G+ G+ V L P P+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.9 bits (84), Expect = 0.26
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 315 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 491
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRRYEN 408
Query: 492 GNKIGNHTPSLA 527
GN T ++
Sbjct: 409 RTIYGNVTSKIS 420
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 37.5 bits (83), Expect = 0.35
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 578 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 748
RG + + + KKLL +A +QDCY AR + LGN+ LT DLW
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLW 61
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.35
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 437
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
Score = 34.3 bits (75), Expect = 3.3
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 667
K T+P +V G V L P GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 37.5 bits (83), Expect = 0.35
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 670
T+P +V K G V L P GTG+++ + +L++AGV+D + G++
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 288 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 437
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.35
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 465 VLPVRR 482
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 37.5 bits (83), Expect = 0.35
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 667
++P +V G+ G+ V LIP GTGI++ + + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.5 bits (83), Expect = 0.35
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 150 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQRIEIIDFFLGPS--LNDEVLKIMPVQK 323
P+ G+ + T S KN + ++ TN + + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 324 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 476
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV 152
Score = 36.7 bits (81), Expect = 0.61
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 515 TVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 667
TVP + K + V L P P+G GI+++ + ++++AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.46
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 446 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 348
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.46
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 437
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 36.7 bits (81), Expect = 0.61
Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = +2
Query: 509 PHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQM----AGVQDCYTSARGSTGT 676
P P ++ S+ LI P T I+S VPK LL + A D SA G T
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDA 199
Query: 677 LGNFXXXXXXXXXXXXXXLTPDLW 748
LG LTPDLW
Sbjct: 200 LGRLAKTTFDAISKTYSCLTPDLW 223
Score = 33.1 bits (72), Expect = 7.5
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 201 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 380
K + E L ++ + I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 381 NGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGNHTPSL 524
GH GL CS EVATAI+ I + L S P+ R GN G PS+
Sbjct: 98 -GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSLPSV 143
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.61
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 465 VLPV 476
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 503 RKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 670
R+ T+ K G+ + + P P GTGIV+ +K +M GV D + GS+
Sbjct: 77 REGRTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 297 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 476
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 315 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 482
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 282 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 461
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 462 SVLPVRR 482
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 34.7 bits (76), Expect = 2.5
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 354 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG--NHTPSLA 527
++ V IG + H G + +++VA A+RG + L V GYW + G ++A
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTVA 61
Query: 528 RSPASVVP 551
S +VVP
Sbjct: 62 YSDVTVVP 69
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 34.7 bits (76), Expect = 2.5
Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Frame = -1
Query: 356 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEINDLNSL 246
LE+CAL TC+ +Y HD+ ++ + +A+E+++D + L
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSDAHGL 1005
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.5
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 273 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 452
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 453 AKLSVL 470
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 270 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 434
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +3
Query: 282 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 461
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 462 SVLPVRR 482
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 256
Score = 33.5 bits (73), Expect = 5.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 636 TPAI*RSFLGTGADTIPVPRGSGISRTVTEP 544
TP + RS G GA T+P RGSG+ T T P
Sbjct: 142 TPVLSRSLSGIGAVTMPNARGSGLLATFTAP 172
>UniRef50_Q4QDA2 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 5756
Score = 33.5 bits (73), Expect = 5.7
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Frame = -1
Query: 587 QYHEVQESAGLLRNHTCR*PCKGRCVVSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAA 408
Q +V+ S LLR+ +C + CV PV +S+ L + + + G F+
Sbjct: 2679 QQADVRRSGALLRSESCDGDVRPACVADASTDPVLASERNENALQRSPAMAQDRGSFVRL 2738
Query: 407 LHTQTNMTVVVANG--NKCLETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLNSLIG 240
L T+ + N L AL C++L ++ ++ + + D LIG
Sbjct: 2739 LLTRAAGPTIAPNDALRVLLRGFALPELCVYLSEVAAESAVLGVQQGTAMADAELLIG 2796
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 33.5 bits (73), Expect = 5.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = -2
Query: 169 QEPTLSGLPCRAHDHGRDH-YRVHEDRHGLYLHRV-----IRXRRENRHVHRLEQRPPL 11
+EPT S CR+ GR H + R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_UPI0000E49E25 Cluster: PREDICTED: similar to smaphorin F;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to smaphorin F - Strongylocentrotus purpuratus
Length = 160
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -2
Query: 595 HNTSTTRFRNQPDCYGTTLAGDLARDGVWFPILLPQ*PLRTGRTDS 458
H+ +T F D Y T+ +ARD V + L P PLRT + +S
Sbjct: 25 HHNTTALFTEDGDLYTGTVMDFMARDAVVYRTLGPSAPLRTAQLNS 70
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 33.1 bits (72), Expect = 7.5
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 225 LLVFFTNQRIEIIDFFLGPSLN---DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 395
LL+F N + ++ F+ N ++++I + K + G+ RFK + IG N IG
Sbjct: 110 LLIF--NYNLFLLFFYKTNKYNKILQKIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIG 167
Query: 396 LGVKCSKEVATAIRGAIILA 455
+GV + AI A A
Sbjct: 168 IGVSKDFYLQEAINKARFFA 187
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 297 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 443
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q0W6L0 Cluster: Predicted signal transduction protein;
n=1; uncultured methanogenic archaeon RC-I|Rep:
Predicted signal transduction protein - Uncultured
methanogenic archaeon RC-I
Length = 992
Score = 33.1 bits (72), Expect = 7.5
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = -1
Query: 401 TQTNMTVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQGRAEEEI--NDLNSLIGKENK 228
++ N + + N C+ T L+GTC +L + + + G A ++I +N+L+ +E+
Sbjct: 313 SEENYRAITTSVNDCILTTDLTGTCTYL---NPRVTELTGYAPDDILNTPVNNLVAEESG 369
Query: 227 *MLSSLSIFPSRTRRPSLVTGTHS 156
++SS+ SR R S+ H+
Sbjct: 370 EIVSSILSSVSRDERRSVEIWIHA 393
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -1
Query: 332 TCLFLYR-HDLKNLIIQGRAEEEIND 258
TCLF R HDL +LI++G ++EEI D
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIAD 306
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 512 HTVPCKVTGK-CGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 667
HT+ +V GK C ++ V ++P P G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_Q87KI0 Cluster: 3-octaprenyl-4-hydroxybenzoate
carboxy-lyase; n=8; Proteobacteria|Rep:
3-octaprenyl-4-hydroxybenzoate carboxy-lyase - Vibrio
parahaemolyticus
Length = 617
Score = 32.7 bits (71), Expect = 9.9
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 177 TRPSCSRRKNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 341
TRP S++ ++ E L QR EIID +L P+ N+ + K+ +AGQ
Sbjct: 462 TRPQISKQDSKVITEADLESLKQQRPEIIDIYLPPTTNNRFAVV--TMKKDQAGQ 514
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +2
Query: 503 RKPHTVPCKVTGKCGSVTVRLIPEPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 670
R+ T+ V GK G+ + L P+GTGI++ + + ++ G++D + G++
Sbjct: 77 REGRTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMGTS 132
>UniRef50_Q9BSM1 Cluster: Polycomb group RING finger protein 1;
n=21; Eumetazoa|Rep: Polycomb group RING finger protein
1 - Homo sapiens (Human)
Length = 247
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -2
Query: 169 QEPTLS--GLPCRAHDHGRDHYRVHEDRHGLYLHRVIRXRRENRHV 38
+EP LS GLP + DH + HY ++++ L L R+ + +N+ V
Sbjct: 129 EEPALSNLGLPFSSFDHSKAHYYRYDEQLNLCLERLSSGKDKNKSV 174
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,287,259
Number of Sequences: 1657284
Number of extensions: 15920976
Number of successful extensions: 45857
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 43060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45722
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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