Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0595
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M12154-1|AAA59992.1| 738|Homo sapiens melanotransferrin protein. 39 0.021
BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding doma... 33 1.0
AK093078-1|BAC04045.1| 710|Homo sapiens protein ( Homo sapiens ... 33 1.0
AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens ... 33 1.0
AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein. 33 1.0
U97502-1|AAC02656.1| 731|Homo sapiens butyrophilin protein. 30 9.7
U23736-1|AAA87023.1| 392|Homo sapiens GATA-3 binding protein G3... 30 9.7
U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ p... 30 9.7
D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding p... 30 9.7
BC030016-1|AAH30016.1| 769|Homo sapiens gephyrin protein. 30 9.7
AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2,... 30 9.7
AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2,... 30 9.7
AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2,... 30 9.7
AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2,... 30 9.7
AJ272343-1|CAC10537.1| 769|Homo sapiens gephyrin protein. 30 9.7
AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger p... 30 9.7
>M12154-1|AAA59992.1| 738|Homo sapiens melanotransferrin protein.
Length = 738
Score = 38.7 bits (86), Expect = 0.021
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 ENLRGKKACFPEFGGLA-YVAFVRTAQLRGVISETECDYVKAVGEFFDGAC 253
+ LRGK++C FG A + V RG I +CD + AV EFF+ +C
Sbjct: 468 DELRGKRSCHAGFGSPAGWDVPVGALIQRGFIRPKDCDVLTAVSEFFNASC 518
>BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding domain
protein 6 protein.
Length = 1003
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 70 TAAAQAEHHALREPSRKEGLLPRIWRACVRRVRAHRPAAGRDQRDR--MRLCESCGRVFR 243
+AAA+A+H L PS +G PR + RP+ R +R RL E G
Sbjct: 325 SAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGPQTP 384
Query: 244 RRLRPGA 264
RR RP A
Sbjct: 385 RRSRPRA 391
>AK093078-1|BAC04045.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ35759 fis, clone TESTI2004737. ).
Length = 710
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 70 TAAAQAEHHALREPSRKEGLLPRIWRACVRRVRAHRPAAGRDQRDR--MRLCESCGRVFR 243
+AAA+A+H L PS +G PR + RP+ R +R RL E G
Sbjct: 31 SAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGPQTP 90
Query: 244 RRLRPGA 264
RR RP A
Sbjct: 91 RRSRPRA 97
>AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens
cDNA FLJ31837 fis, clone NT2RP7000069, weakly similar to
MUCIN 1 PRECURSOR. ).
Length = 1003
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 70 TAAAQAEHHALREPSRKEGLLPRIWRACVRRVRAHRPAAGRDQRDR--MRLCESCGRVFR 243
+AAA+A+H L PS +G PR + RP+ R +R RL E G
Sbjct: 325 SAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGPQTP 384
Query: 244 RRLRPGA 264
RR RP A
Sbjct: 385 RRSRPRA 391
>AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein.
Length = 967
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 70 TAAAQAEHHALREPSRKEGLLPRIWRACVRRVRAHRPAAGRDQRDR--MRLCESCGRVFR 243
+AAA+A+H L PS +G PR + RP+ R +R RL E G
Sbjct: 289 SAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGPQTP 348
Query: 244 RRLRPGA 264
RR RP A
Sbjct: 349 RRSRPRA 355
>U97502-1|AAC02656.1| 731|Homo sapiens butyrophilin protein.
Length = 731
Score = 29.9 bits (64), Expect = 9.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 1 LSPVKLVQNTRSGASRVAAFVKETAAAQAEHHALREPSRKEG 126
LSP+ L++ + SG +R F K+ + HA+ SRK G
Sbjct: 445 LSPMTLMRESHSGQARDTGFWKDLLSMAQALHAVALKSRKNG 486
>U23736-1|AAA87023.1| 392|Homo sapiens GATA-3 binding protein G3B
protein.
Length = 392
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 488 CKPISSVPLSEQHARRDAWRVH*RQLSPSLRCRRGGSVQKRRPAEQ 625
CK V + + RR RVH R L P R+GG + + PAEQ
Sbjct: 327 CKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQ 372
>U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ
protein.
Length = 1719
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 488 CKPISSVPLSEQHARRDAWRVH*RQLSPSLRCRRGGSVQKRRPAEQ 625
CK V + + RR RVH R L P R+GG + + PAEQ
Sbjct: 485 CKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQ 530
>D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding
protein protein.
Length = 1482
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 488 CKPISSVPLSEQHARRDAWRVH*RQLSPSLRCRRGGSVQKRRPAEQ 625
CK V + + RR RVH R L P R+GG + + PAEQ
Sbjct: 284 CKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQ 329
>BC030016-1|AAH30016.1| 769|Homo sapiens gephyrin protein.
Length = 769
Score = 29.9 bits (64), Expect = 9.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 276 RGVQCSRAQAPSKNSPTAFT*SHSVSLITPRSWAVRTNATYASP 145
+GVQC + K+S A T S S IT + A + + Y SP
Sbjct: 208 KGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKKHPFYTSP 251
>AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2,
with ZNF domain protein.
Length = 1718
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 488 CKPISSVPLSEQHARRDAWRVH*RQLSPSLRCRRGGSVQKRRPAEQ 625
CK V + + RR RVH R L P R+GG + + PAEQ
Sbjct: 485 CKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQ 530
>AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2,
with ZNF domain protein.
Length = 1540
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 488 CKPISSVPLSEQHARRDAWRVH*RQLSPSLRCRRGGSVQKRRPAEQ 625
CK V + + RR RVH R L P R+GG + + PAEQ
Sbjct: 343 CKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQ 388
>AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2,
with ZNF domain protein.
Length = 1481
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 488 CKPISSVPLSEQHARRDAWRVH*RQLSPSLRCRRGGSVQKRRPAEQ 625
CK V + + RR RVH R L P R+GG + + PAEQ
Sbjct: 284 CKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQ 329
>AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2,
with ZNF domain protein.
Length = 1718
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 488 CKPISSVPLSEQHARRDAWRVH*RQLSPSLRCRRGGSVQKRRPAEQ 625
CK V + + RR RVH R L P R+GG + + PAEQ
Sbjct: 485 CKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQ 530
>AJ272343-1|CAC10537.1| 769|Homo sapiens gephyrin protein.
Length = 769
Score = 29.9 bits (64), Expect = 9.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 276 RGVQCSRAQAPSKNSPTAFT*SHSVSLITPRSWAVRTNATYASP 145
+GVQC + K+S A T S S IT + A + + Y SP
Sbjct: 208 KGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKKHPFYTSP 251
>AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger
protein 2 variant protein.
Length = 1576
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 488 CKPISSVPLSEQHARRDAWRVH*RQLSPSLRCRRGGSVQKRRPAEQ 625
CK V + + RR RVH R L P R+GG + + PAEQ
Sbjct: 342 CKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQ 387
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,507,200
Number of Sequences: 237096
Number of extensions: 2331202
Number of successful extensions: 7339
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7338
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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